Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g0817 ATGGGAAAGCACATGCAACGTGATCACTCTGGCATTGCCTTTAAGAGTAATGATCCAGGATGCATGTGGGGCATACTTCAAATGCTTGACCACAGTCACTGGCATAATTTCAAAAAACGACTACCATATAAAAGGCACTGTGGTGGAAGACATGCCATGGGGGTTGCAAATCCAGGGAAAAATATAAACATATCCAATGCTGATGAAGTACAAGAATGCATTGTTGCTGAAATGGACAAGTCTCAGATTGAAAAACAGATGATGAAATCCAGTCAGACAACAAAAAGCTCTGGGAAAGCTCGAATAAAAGCATTGATTGCTAAAGATGTGTCTAAAAGAAAGGGCCAACATCACCGAAATTCGACCCACCCAACACGCTCACAGTTGCTGAGAACCGAATCTATCCATCGTTTAGAATATGCAGATCGGGATCCCCTTGCTGATATAATCTTAAATGATGAGAGTCCAAGTTCACACCAAAACAATGAAAATTCTTCTGATACTAGCACAACAAATGTAATGCAGGCGAGTGATCCTGAGGAGCCAATTCCTAGCAACAAAAATTGCGAGGCATGTAGCACCACAGGTACTTTGAATTACTTGGGGCATGGAAAGATTGATAATCATGGAAAGAAACTAGTTGATAACCAAACATTTCTTGAGGAGTCATCAGACAAACCAACACAAGCTTTGTCAGCACAGAAATTGTTGTATGCAACAGAGCCCTCTGGAGTCCCTCCGTCAAAGGAGTTTCTGGATGCTCTTTGTATAATCAACATGAACAGGGAGTTCTTCCTCAAAATTGTACAGGACCCTGAGTCTCCTTGGGCATATCATTTCCATCATCAATGGGCAAGAGGTGTGAAGTCTGGATTATCCAAGTCTGGGTCATTTCCTGTGCCTGGGCCATCAGGTGGAAGGGATTTTGGGCCAATTGAACTTAAGTACAATCAGAATGAGATCACTTCCCATGCAAGATCAGAAAGCAAGTTGCAAGCTGGTGGTCAAACCCAAAATTTGGCTGAGTTTGAGTCTACAGAAGATGTCAGTGAACAGTCAAAGTTTGGAATCACTGATGATTCTTCTCTAGGTTTGCCCCATCACTTCAAGCGCTGGAGTGAGAATCAAGTGGCCATCAGGCGTTTCAAGGATCTTAAACAGAAGATAAAACATGCTATCAGACAGAGCAAAAAGGAGCGCCACCGGATCATTATGGATGCAATCTTTCACAAAGTTCCTCATGGCCATAGGTTTTCCAAAGATGCAAAGAAGCAGATTGCTGATCAATGGAAGGAACCTGCAACCAGTAGAAACAGTGAAGACAGCCCTGGAAGCAGTTATGGATGGGGTCATTCTGAACCTGCCCTCAGCAAGCAGACTTCATTTCCCAGCAAATCCCTAGAAAAATATACTCAGTTGTTTGAGTCTAGTTTCAACAAAGAAGCCAAATACCAGATCTCTGAAAGATTAAAGGTGAGAACAGAAGATGTGGGTTTGCCTTGTGGAAGTGACCCAAAATCCCTGAGAAGGATTCTTTCGTTACCTGATTTTAAATCCTATTTTGGTCTTCAGAGTGAGGACTCTGGTGATAATTATTTGTCAGAAATGGCAGTCAATACTGTAAGAATACAAAGTGATTATGATGAACAGAAGTCTCTAGAACTTCCTCTAGGTTCTGAAAATCATGTACAGTTTGATGCCATTGGAGAAAGTAAAAAACACTTGGTAGAAGCTAGTGAAACATATCCAGTTAAACAAGATCAGGTGAGACCAACATCAGCCACAGATGCTGAAGTGAATGCAGCGGATTGGACTAATGATGATTTAGGTGATGTAACAAAGCAGGATACTACATTTTACCAAGGACAAGGAATCAGGACCACAAAAAAATTTAATGCAAATCTGTCAGAACCAAGCCCAATCTCTGTGCTTGACTCCAATGTGCGAGAGGACTTAAAGTTTCAAGATATAGTCAGTCCGGGAAAGCTCCCCATATCAGAAGATTCAGAATTAGAATCAAGACGGCCCCTTTATGAAGGACCGGATTCTGCAGTCAATCAGCAACATGAATCCAGCATGGATTCTCCTACAGTTGTTGAAAGCAGATTTGATGTTGAGAAAGTAGATCTCAGGAAGCACTTAGACAGCGACTTTTTTCCTGTTCAAGTGGATATAAAAAACAAAGCTGAATTCAACTATGTTAGAGATGTGCTAGAGTTGTCGGGGATTATCAGGAATGAATTGCTTGAGACATGGCATTCCATTGACAAGCTAGTGGATCCTTCAGTGTTTGAGGAAGTGGAAGGCTGCTTGCCCCTTGAACCTGAGTGTTCAGGAAATGAAGAAGATGGAAGTTGCAGCCATCTGCTTCTGTTTGATTTAATCAATGAGGTGCTAATGGAGATTTATGAGAGATCATTGACCTACTGCCCCAGGCACCTGTCTTCCCTTTCCCACATCCGTCCAATGCCTGTGGGATATCATGTTCTTGAGGAGGTCTGGGCAAATATAAGCTGGTACTTCAGCTGGGAACCTGATCCTGACCAAACGCTGGATTATGTGGTGAGTAGGGATCTAGCAAAAGGTGATGGGTGGATGAACCTTCAATTCGAGGCCGAGTGCTTGGGGCTTGAGCTGGAGGACTGGATATTTGATGATCTTCTGGATGAACTTCTTTGCACCTGA 2685 0.4257 MGKHMQRDHSGIAFKSNDPGCMWGILQMLDHSHWHNFKKRLPYKRHCGGRHAMGVANPGKNINISNADEVQECIVAEMDKSQIEKQMMKSSQTTKSSGKARIKALIAKDVSKRKGQHHRNSTHPTRSQLLRTESIHRLEYADRDPLADIILNDESPSSHQNNENSSDTSTTNVMQASDPEEPIPSNKNCEACSTTGTLNYLGHGKIDNHGKKLVDNQTFLEESSDKPTQALSAQKLLYATEPSGVPPSKEFLDALCIINMNREFFLKIVQDPESPWAYHFHHQWARGVKSGLSKSGSFPVPGPSGGRDFGPIELKYNQNEITSHARSESKLQAGGQTQNLAEFESTEDVSEQSKFGITDDSSLGLPHHFKRWSENQVAIRRFKDLKQKIKHAIRQSKKERHRIIMDAIFHKVPHGHRFSKDAKKQIADQWKEPATSRNSEDSPGSSYGWGHSEPALSKQTSFPSKSLEKYTQLFESSFNKEAKYQISERLKVRTEDVGLPCGSDPKSLRRILSLPDFKSYFGLQSEDSGDNYLSEMAVNTVRIQSDYDEQKSLELPLGSENHVQFDAIGESKKHLVEASETYPVKQDQVRPTSATDAEVNAADWTNDDLGDVTKQDTTFYQGQGIRTTKKFNANLSEPSPISVLDSNVREDLKFQDIVSPGKLPISEDSELESRRPLYEGPDSAVNQQHESSMDSPTVVESRFDVEKVDLRKHLDSDFFPVQVDIKNKAEFNYVRDVLELSGIIRNELLETWHSIDKLVDPSVFEEVEGCLPLEPECSGNEEDGSCSHLLLFDLINEVLMEIYERSLTYCPRHLSSLSHIRPMPVGYHVLEEVWANISWYFSWEPDPDQTLDYVVSRDLAKGDGWMNLQFEAECLGLELEDWIFDDLLDELLCT* 895
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g0817 894 MobiDBLite consensus disorder prediction 415 430 - -
Vvi8g0817 894 MobiDBLite consensus disorder prediction 153 186 - -
Vvi8g0817 894 Pfam Domain of unknown function (DUF4378) 730 890 IPR025486 -
Vvi8g0817 894 MobiDBLite consensus disorder prediction 431 461 - -
Vvi8g0817 894 MobiDBLite consensus disorder prediction 415 461 - -
Vvi8g0817 894 Coils Coil 375 395 - -
Vvi8g0817 894 MobiDBLite consensus disorder prediction 664 698 - -
Vvi8g0817 894 MobiDBLite consensus disorder prediction 684 698 - -
Vvi8g0817 894 MobiDBLite consensus disorder prediction 151 186 - -
Vvi8g0817 894 Pfam Protein of unknown function (DUF3741) 247 274 IPR022212 -
Vvi8g0817 894 PANTHER PROTEIN TRM32 1 894 IPR044257 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi8g0817 Vvi-Chr8 14622794 14627264 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi8g0817 248 884 TRM (TON1 Recruiting Motif) Superfamily AT5G02390 35.846 2.19e-97 322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g0817 - - vvi:104880169 1817.74