Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g0788 ATGACAGTCAACATAACCTCGATTAGCACATCGTCCAACGGAGTCTGGCAAGGTGATAATCCCTTGGATTTCGCCTTCCCGTTGTTAATAGTTCAAACTACCTTGATCCTCGCCCTCAGTCGCTTCCTTGCATTTCTTCTTAAACCCCTCCGTCAACCCAAAGTCATTGCAGAGATTATTGGTGGGATTTTACTTGGACCCTCTGCTTTGGGGCGAAACCAGAATTACTTGCACCGAATTTTTCCGAGTTGGAGCACTCCGATACTGGAATCTGTGGCAAGTATAGGGCTTCTGTTTTTTCTCTTCCTTGTGGGTCTCGAATTGGATCTCAGCTCCATTCGTCGGAGCGGCAGAAAAGCCCTCAGTATAGCGACGGTCGGAATTACTCTTCCTTTTGTCTGCGGCGTAGGGGTCGCCTTTGTACTTCGGAAAAGTGTTGACGGAGCCGACAAAGCCGGTTATGGTACCTTCCTCGTGTTCATGGGAGTGGCCCTTTCTATTACCGCCTTCCCCGTCCTCGCTCGTATATTGGCTGAACTCAAACTACTCACCACCCGGGTGGGTGAGACCGCCATGGCCGCCGCTGCGTTCAACGACGTGGTTGCGTGGATTTTGCTGGCTCTGGCAGTGGCTCTCGCCGGCGACGGAGAAGGTGGAGAACACAAGAGCCCATTAATATCAGTGTGGGTCCTCCTCTCTGGTGTTGCTTTTGTTATTTTCATGATGGTAGTGATAAAGCCGGCGATGAGTTGGGTAGCTCGGCGCTCGCCGGACAGCCACTCAGTAGACGAAGCCTATATATGCTTGACCCTTGCGGGAGTAATGGTGTCGGGATTTGTGACGGATCTGATAGGAATCCACTCCATATTTGGCGCGTTTGTGTTCGGACTAACCATTCCGAAAGGAGGAGGATTTTCAGAAAGACTGATAGAGAGGATAGAAGACTTTGTAACAGGGTTACTTCTTCCACTATACTTTGCGTCGAGCGGGTTAAAGACGAACGTTGCTAAAATACGGGGTTTGGAGGCGTGGGGACTATTGGTGCTGGTGATCACAACGGCATGTGCAGGCAAGATTGTCGGAACCTTCGTGGTGGCCATGATGTGTATGATTCCCGCAAGGGAATCCCTCACGCTGGGTGTGTTGATGAATACCAAAGGCTTAGTTGAGCTTATTGTTCTCAACATCGGAAAGGAGAAGAAGGTCCTCAACGACGAGATCTTTGCAATTCTAGTCCTTATGGCATTATTCACCACCTTCATGACAACTCCGATAGTGATGACCATTTACAAACCGGTACGTGGAGGCCCCGCTCGCACTCACCGGAGATTACGCGACTTCTCCAGCGTTGACAGCTCCAAATACGACCTCCGAATCCTGGCCTGCGTCCACGGGCCCGGAAACGTGCCTTCACTCATCAGCCTCATAGAGGCTACTCGGAGCGCTAAGAAATCTCAACTCAAACTATATGTAATGCGTCTGGTTGAGCTCACTGAGAGATCCTCCTCCATCATTATGGTCCAACGCGCCCGAAAGAATGGGTTCCCCTTCATCAACCGCTTCCGCCGGGGCCAGTCAGACGACCGAGTTGAGGTTGCATTTGAAGCGTACGGTCAATTGGGTCGAGTCTCAGTGCGACCAACCACGGCCATCTCATCATTATCCACTATGCACGAGGACATTTGCCATGTGGCTGAAGAAAAGAGGGCGACCATGGTTATCTTGCCCTTCCACAAGCAGTGGAAAGGAGAGGGCTACGAGTCGATGGAGAACATGGGTAACGGTTGGAGAGGGGTTAATCAGAGGGTCCTCAAGAACTCGCCTTGTTCGGTGGCTGTCCTTGTGGACCGTGGATTTGGGAGTGGGCCACAGCAGACACGTGGGCCCACCTCTACTGTCACTCAACGGATTTGTATATTGTTCTTTGGTGGGCCGGATGACCGCGAGGCTTTGGAGTTGGGTGCAAGAATGGCTGAGCACCCAGCGGTTAAGGTGACCGTAATAAGGTTCGTTGAAAAAGACGGTTCAGACAGTAAAGACATTATTTTACGGCCTTCTCCAGAAAAATGCGATGAGCAGAGCTATAGCTTCTCAACCGCCGCCATGGACCGCCAGAAGGAGAAGGAGTTGGACGAGATTGCGACGGCGGAGTTCAAGAGCAGGTGGGGAGGGTTGGTGGAGTACGTAGAGAAGGTGGCGAGCAACGTCGTGGAGGGAGTGTTGGCAATAGGGAAGAGTGGGGATTACGATCTGGTGGTGGTGGGCAAGGGTCGATTCCCGTCGACAATGGTAGCGGAACTGGCGGAACGGCAAGCGGAGCACGCAGAGTTAGGGCCGATTGGAGACATATTGGCGTCGTCGGGACAGGGGATTGTGTCCTCCGTGCTTGTGATTCAGCAACACGATATAGCTCATGCAGAGGAAGTTCCGGTGTCTAAGGTAGTCAACAGTAAGGATGCTACAAGCAACGGTGATGATGGACCCTCTAAAAGGAGAGAAGTCACAAATGACTGTGTGTGA 2520 0.5187 MTVNITSISTSSNGVWQGDNPLDFAFPLLIVQTTLILALSRFLAFLLKPLRQPKVIAEIIGGILLGPSALGRNQNYLHRIFPSWSTPILESVASIGLLFFLFLVGLELDLSSIRRSGRKALSIATVGITLPFVCGVGVAFVLRKSVDGADKAGYGTFLVFMGVALSITAFPVLARILAELKLLTTRVGETAMAAAAFNDVVAWILLALAVALAGDGEGGEHKSPLISVWVLLSGVAFVIFMMVVIKPAMSWVARRSPDSHSVDEAYICLTLAGVMVSGFVTDLIGIHSIFGAFVFGLTIPKGGGFSERLIERIEDFVTGLLLPLYFASSGLKTNVAKIRGLEAWGLLVLVITTACAGKIVGTFVVAMMCMIPARESLTLGVLMNTKGLVELIVLNIGKEKKVLNDEIFAILVLMALFTTFMTTPIVMTIYKPVRGGPARTHRRLRDFSSVDSSKYDLRILACVHGPGNVPSLISLIEATRSAKKSQLKLYVMRLVELTERSSSIIMVQRARKNGFPFINRFRRGQSDDRVEVAFEAYGQLGRVSVRPTTAISSLSTMHEDICHVAEEKRATMVILPFHKQWKGEGYESMENMGNGWRGVNQRVLKNSPCSVAVLVDRGFGSGPQQTRGPTSTVTQRICILFFGGPDDREALELGARMAEHPAVKVTVIRFVEKDGSDSKDIILRPSPEKCDEQSYSFSTAAMDRQKEKELDEIATAEFKSRWGGLVEYVEKVASNVVEGVLAIGKSGDYDLVVVGKGRFPSTMVAELAERQAEHAELGPIGDILASSGQGIVSSVLVIQQHDIAHAEEVPVSKVVNSKDATSNGDDGPSKRREVTNDCV* 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g0788 839 Gene3D - 457 778 - -
Vvi8g0788 839 Gene3D - 28 434 IPR038770 -
Vvi8g0788 839 FunFam Os05g0113300 protein 635 799 - -
Vvi8g0788 839 Pfam Sodium/hydrogen exchanger family 36 426 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Vvi8g0788 839 PANTHER CATION/H + ANTIPORTER 9 802 - -
Vvi8g0788 839 MobiDBLite consensus disorder prediction 824 839 - -
Vvi8g0788 839 MobiDBLite consensus disorder prediction 814 839 - -
Vvi8g0788 839 FunFam Cation/H(+) antiporter 15 28 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi8g0788 Vvi-Chr8 14416486 14420425 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi8g0788 76 825 Antiporter Super Family AT3G53720 68.750 0.0 970
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g0788 - - vvi:100264818 1596.64