Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g0787 ATGGAGTGTCTGCATATTTTTCTAAGCAGCGGTTTGGCCAAGACCGGCAGTCTTGCTGATCATAAGACAACAATGGCGTTCAACATGACGTCCATTAAGACATCATCTGATGGAGCTTGGCAAGGTGATAATCCGCTGAGGTTTGCCTTCCCACTTCTCATTGTTCAAACCACCTTAGTCCTCAGCATCAGCCGTTTTCTCGCCTTCCTCCTCAAACCCTTCCATCAACCCAGAGTCATTGCCGAGATTATTGGTGGAATTCTGCTCGGACCTTCAGCTCTGGGCCGAAACAAAGATTTCTTGCACCTTGTTTTTCCGCCGTGGAGCACTCCGATACTGGAGTCGGTGGCAAGTGTTGGTCTTCTCTTCTTTTTATTTCTTGTTGGTCTTGAACTCGATTTAAGTTCCATTCGCCGCAGCGGAAAAAGAGCTTTCGGAATAGCACTTGCTGGAATCTCCCTCCCCTTTATCTTCGGAGTTGGAATCACCTTCCTCCTTCGGAAAGCTGTTGATGGAGAGGACAAAGTGGGCTTCAGTCAATGCATCTTGTTCATTGGGGTCTCCCTCTCCATCACTGCCTTTCCCGTTCTCGCGCGCATTTTAGCAGAACTCAAGCTACTAACAACCGACGTGGGCCAGACCGCCATGGCCGCCGCCGCCTTCAACGACGTGGCCGCCTGGATCTTGCTGGCCCCGGCCGTAGCCCTAGCAGGTAATGGGGGATCACATAGCAGCCCATTAGCTTCCATATGGATCCTTATTTCAGGCGTTGCTTTTGTGGCCTTCATGCTAACCATCATTCGCCCAGCAATGAATTGGGTTGGTCGCCAGTGCTCGCGGAAGCACGATTCCATGGACGAAGCGTATATCTGTCTGACCTTAGCGGGAGTGATGCTATCCGGGTTTACGACAGACCTTATAGGAATACACGCCATATTTGGAGGGTTCGTGTTCGGATTAACCATTCCCAAAGGCGGAGAATTTGCACAGAGATTAATAAAAAGGATAGAAGATTTCGTTACAGGCTTGCTTCTGCCGCTCTACTTCGCTTCAAGCGGATTGAAGACGGACGTGGCGAAAATACAGGGAGTGAAGGCGTGGGGGCTGTTGGTGTTGGTGATATCGACGGCGTGCGCGGGGAAGGTACTGGGGACGTTTGTAGTGGCAATGCTGTGTATGACGCCGGTGAGGGAATCTTTGGTGTTGGGCGTTCTGATGAATACTAAAGGCCTGGTGGAGCTTATAGTTCTCAATATTGGCAAAGAGAAGAAGGTACTTAACGATGAGGTGTTTGCAATTTTGGTGCTCATGGCACTCTTCACCACCTTCATGACAACTCCAGCAGTGATGGCCATTTACAAACCCATCCGACGAATAGCCACACAGGCTCAGCCTCAAATACAGCGGGAATCGAATGTGGCTGAAAACTCATCACAGGACAAGCTTCGGATCCTGGCTTGTGTGCATGGTCCTGCAAATGTACCCTCACTTATCAGCCTCATTGACTCCACTTGTAACGCTAACAAATCCCCACTCAAGCTTTACGTGATGCATCTGATGGAGCTCACTGATCGCACCTCCTCCATCCTTATGGTTCAACGTGGCAGGAAGAATGGATTTCCATTCATCAAAGGCTTTCGGAGAGGGGAGTTGAAGGACCAAGTGGGTGCTGCATTTGAGCCCTACGCTCATTTCGGGAGAGTCACTGTTCGGCCAACCAAGGCCATCTCGGCTTTGTCCACGATGCATGAGGACATTTGCCATGCGGCCAAAAAGAAACGGGTTGGAATGATCGTCTTGTCCTTCCACAAGCAGTGGAGAGGAGAGGGAGAGGAGGCGGTGGAGAATGTGGGACATGAATGGAGAGGAGTGAATCAAAGGGTACTAAAAAATGCACCCTGCCCGGTGGGGGTGCTTGTGGACCGTGGATTTGGTGGAGTTGAAAGGAGGGTGTGCATATTGTTCTTGGGCGGGCCAGATGACCGCTACGCTTTGAAACTGGGCGGGAGTATGGCTGAGCATTCGGCAGTTAGAGTGACACTAGTGAGGTTGGTTGAAAAGGGTAAGATTGACTCTAACAGCATCAGTTCCCAGGGACTGGCACAGGATGGATGTATAGACGTATGTTGTGCCTCCTCAACTACTCCTATCTACTGTGGGAAGGAGAAGGAGCTGGATGAGGCAACAGTTGCAGAATTTAGGAGTAGGTGGGAAGGGTCAGCAAAGCACGTGGAGAAGGAGGTTGAGGCCACCAACGTGTTGGAAGAGGTGTTGTTGGCAATAGGCCGGTGCAGGGAGTATGAGCTGATCGTAGTGGGTAAGGGTGGATTTCCACCAAATATGGTAGCAATAGCACAACTGTCGGATCACCAACCAGAGCATGCTGAGTTGGGTCCCATTGGAGACGTGTTGGCATCTTCAGGACGAGGCATCACGGCTTCTGTGCTCGTCATTCAGCACCACTCCTTACCACATGAACACCACCAACCACTGTTGATGCCAATCCATGATCACATGGATGATACCATCACGGCTGAGGAACCCACAGTCTGA 2553 0.508 MECLHIFLSSGLAKTGSLADHKTTMAFNMTSIKTSSDGAWQGDNPLRFAFPLLIVQTTLVLSISRFLAFLLKPFHQPRVIAEIIGGILLGPSALGRNKDFLHLVFPPWSTPILESVASVGLLFFLFLVGLELDLSSIRRSGKRAFGIALAGISLPFIFGVGITFLLRKAVDGEDKVGFSQCILFIGVSLSITAFPVLARILAELKLLTTDVGQTAMAAAAFNDVAAWILLAPAVALAGNGGSHSSPLASIWILISGVAFVAFMLTIIRPAMNWVGRQCSRKHDSMDEAYICLTLAGVMLSGFTTDLIGIHAIFGGFVFGLTIPKGGEFAQRLIKRIEDFVTGLLLPLYFASSGLKTDVAKIQGVKAWGLLVLVISTACAGKVLGTFVVAMLCMTPVRESLVLGVLMNTKGLVELIVLNIGKEKKVLNDEVFAILVLMALFTTFMTTPAVMAIYKPIRRIATQAQPQIQRESNVAENSSQDKLRILACVHGPANVPSLISLIDSTCNANKSPLKLYVMHLMELTDRTSSILMVQRGRKNGFPFIKGFRRGELKDQVGAAFEPYAHFGRVTVRPTKAISALSTMHEDICHAAKKKRVGMIVLSFHKQWRGEGEEAVENVGHEWRGVNQRVLKNAPCPVGVLVDRGFGGVERRVCILFLGGPDDRYALKLGGSMAEHSAVRVTLVRLVEKGKIDSNSISSQGLAQDGCIDVCCASSTTPIYCGKEKELDEATVAEFRSRWEGSAKHVEKEVEATNVLEEVLLAIGRCREYELIVVGKGGFPPNMVAIAQLSDHQPEHAELGPIGDVLASSGRGITASVLVIQHHSLPHEHHQPLLMPIHDHMDDTITAEEPTV* 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g0787 850 FunFam Cation/H(+) antiporter 15 52 460 - -
Vvi8g0787 850 Gene3D - 52 462 IPR038770 -
Vvi8g0787 850 PANTHER CATION/H + ANTIPORTER 32 821 - -
Vvi8g0787 850 Gene3D - 506 826 - -
Vvi8g0787 850 Pfam Sodium/hydrogen exchanger family 59 448 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi8g0787 Vvi-Chr8 14398878 14405319 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi8g0787 100 825 Antiporter Super Family AT3G53720 59.868 0.0 797
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g0787 - - vvi:100246026 1657.5