Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g0774 ATGTACGGAGAGACCATGAGCGCCAAGTGCCGATTCACCGACACCGACATTACTAAGGTCTTGGCCACTTACTTCCCCGAAATCCAATTGTCGGCCAACGACCCTCGCCTCCACGTCACTTCTCAACTCATTCACTTCTTTTCTTCCCCATCCGCCCAACAATTCGTTTCGCAGGTCAAGAATGATGATGACATCTTCTCTTTGTCGCTTGACTTCAAACAATTTCATAAGATATGCGACCTTGAGGACTTTTATGCAGCTTTAGATACAAAACCTAAAGAAGCTTTATTATGTATGAGTGCTGCAGTTCACAAGGTTTTATCGACCAACTGGGATGACAATAGGTTGGAGGATGGTGTGAAGATAAATATCCGTCTGCACAACCACCCTGAAACTATGATTGCTTTGAAGAACCTAAAATCAGCATATATTGATAAACTTGTATCTGTACGTGGTACAGTAGTAAAAGCTAGCACGGTCAAGCCTCTAGTTGTACAGATGACTTTTGCCTGTGTTAAACTACAGGAGATACTAAAGTCTGAAAATCATGAAGAAGGCCGGGTGCCTCGAACAGTAGAGTGTGAATTGACCGAAGATCTAGTTGATGCATGCATTCCTGGAGATGTGGTGACTGTTACTGGAATTATAAGGCAAATCAATAATTACATGGATATTGGTGGAGGAAAATCAAAAAACAAGAACCAAGGATTGTTCTATTTGTACCTAGAAGCAGTTTCAATTAAAAATTCCAAGTCGCAGTATATATCTGAGGATTTGCAAGATTCTAATGCTGATGCTAGAGCTACAGAGCTGTTAGATTTATTCTCATTTTCTCCAAGAGATTTGGAATTCATTGTTAAGTTCTCAGAGGAACATGGTTCAGACAGATTTCGACAAATACTACAATCAATTTGCCCTTCCATTTATGGACATGAGCTTGTCAAAGCGGGAATAACATTAGCACTGTTTGGAGGTGTCCAAAAGTATTCAACGGATAAGAACAAGGTCCCTGTCAGAGGAGACATCCATATCATAGTTGTTGGTGATCCTGGACTCGGTAAAAGCCAACTATTGCAAGCAGCAGCTGCCATTTCTCCACGTGGCATTTATGTGTGTGGCAATGCTACAACCAATGCTGGGCTTACTGTAGCTGTTGTGAAGGATCCTATGACAAGTGACTATGCTTTTGAGGCTGGTGCCATGGTCCTTGCTGATCGTGGATTATGCTGTATTGATGAGTTTGACAAAATGTCAGCAGAACATCAGTCTCTTCTAGAAGCCATGGAGCAACAGTGTGTCTCTGTTGCAAAGGCTGGACTTGTGGCAAGTTTATCAGCACGAACTTCTGTCTTAGCAGCGGCAAATCCTGTTGGTGGTCATTATAACCGTGCAAAAACTGTGAATGAAAATTTGAAAATGAGTGCTGCTCTTCTTTCACGGTTTGATTTGGTTTTCATATTACTTGATAAACCTGATGAGCTACTGGATAAGCGAGTCTCCGAGCATATTATGTCACTTCATGCTGGATGTGGAGAAAATTCACCAGCTGCAAAAAGGCCATATATTGCTGCTCACACTGTTGGAGGCATAGATATGAATGCAAAAAGTGGTTCTTTAGTTTCAAGGTTGAGACTTGACCCAAAAAAGGACATGGATTTTGTTCCATTGCCTGCTCCACTTCTTCGCAAATATATTGCTTATGCACGAACTTTTGTCTTTCCGAGAATGTCAAAACCAGCAGCAGAAATACTACAGAAGTTTTACTTACGACTAAGAGACCATAGTACATCAGCAGATGGTACGCCAATAACTGCAAGGCAACTGGAAAGTTTAGTGAGGCTGGCTGAAGCTCGAGCCAGGCTGGACTTGAGAGAAGAAATAACAGCCCAGGATGCTTTGGATGTTGTTGAGATAATGAAGGAATCACTGTATGACAAGTACGTTGATGAGCATGGTTTTGTGGATTTTGGTCGGAGTGGGGGAATGAGTCAGCAGAAAGAAGCAAAACGATTTTTAGGTGCCCTGCATAAACAAACAGAGTTGCAGAAAAAAGATTGCTTTTCAATTTCCGAAATATACAATTTAGCAGATAGAATTGGATTAAGAGTTCCGGATATTGACACTTTTGTGGATAATTTAAACACTGTTGGTTATCTACTCAAGAAGGGCCCTAAGACGTATCAGGTACTGTGA 2193 0.4145 MYGETMSAKCRFTDTDITKVLATYFPEIQLSANDPRLHVTSQLIHFFSSPSAQQFVSQVKNDDDIFSLSLDFKQFHKICDLEDFYAALDTKPKEALLCMSAAVHKVLSTNWDDNRLEDGVKINIRLHNHPETMIALKNLKSAYIDKLVSVRGTVVKASTVKPLVVQMTFACVKLQEILKSENHEEGRVPRTVECELTEDLVDACIPGDVVTVTGIIRQINNYMDIGGGKSKNKNQGLFYLYLEAVSIKNSKSQYISEDLQDSNADARATELLDLFSFSPRDLEFIVKFSEEHGSDRFRQILQSICPSIYGHELVKAGITLALFGGVQKYSTDKNKVPVRGDIHIIVVGDPGLGKSQLLQAAAAISPRGIYVCGNATTNAGLTVAVVKDPMTSDYAFEAGAMVLADRGLCCIDEFDKMSAEHQSLLEAMEQQCVSVAKAGLVASLSARTSVLAAANPVGGHYNRAKTVNENLKMSAALLSRFDLVFILLDKPDELLDKRVSEHIMSLHAGCGENSPAAKRPYIAAHTVGGIDMNAKSGSLVSRLRLDPKKDMDFVPLPAPLLRKYIAYARTFVFPRMSKPAAEILQKFYLRLRDHSTSADGTPITARQLESLVRLAEARARLDLREEITAQDALDVVEIMKESLYDKYVDEHGFVDFGRSGGMSQQKEAKRFLGALHKQTELQKKDCFSISEIYNLADRIGLRVPDIDTFVDNLNTVGYLLKKGPKTYQVL* 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g0774 730 Coils Coil 411 431 - -
Vvi8g0774 730 SMART AAA_5 340 492 IPR003593 GO:0016887
Vvi8g0774 730 SUPERFAMILY Nucleic acid-binding proteins 63 220 IPR012340 -
Vvi8g0774 730 Pfam MCM OB domain 172 219 IPR033762 -
Vvi8g0774 730 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 306 649 IPR027417 -
Vvi8g0774 730 FunFam Minichromosome maintenance 8 homologous recombination repair factor 134 252 - -
Vvi8g0774 730 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 173 679 IPR031327 GO:0003677|GO:0005524|GO:0032508
Vvi8g0774 730 CDD MCM8 300 642 - -
Vvi8g0774 730 PRINTS Mini-chromosome maintenance (MCM) protein family signature 477 485 IPR001208 GO:0003677|GO:0005524|GO:0032508
Vvi8g0774 730 PRINTS Mini-chromosome maintenance (MCM) protein family signature 426 439 IPR001208 GO:0003677|GO:0005524|GO:0032508
Vvi8g0774 730 PRINTS Mini-chromosome maintenance (MCM) protein family signature 450 462 IPR001208 GO:0003677|GO:0005524|GO:0032508
Vvi8g0774 730 PRINTS Mini-chromosome maintenance (MCM) protein family signature 339 354 IPR001208 GO:0003677|GO:0005524|GO:0032508
Vvi8g0774 730 PRINTS Mini-chromosome maintenance (MCM) protein family signature 399 413 IPR001208 GO:0003677|GO:0005524|GO:0032508
Vvi8g0774 730 Gene3D - 274 652 IPR027417 -
Vvi8g0774 730 Pfam MCM AAA-lid domain 560 643 IPR041562 -
Vvi8g0774 730 Gene3D - 133 252 IPR012340 -
Vvi8g0774 730 CDD MCM8_WHD 665 730 - -
Vvi8g0774 730 ProSiteProfiles MCM family domain profile. 296 503 IPR001208 GO:0003677|GO:0005524|GO:0032508
Vvi8g0774 730 SMART mcm 132 644 IPR031327 GO:0003677|GO:0005524|GO:0032508
Vvi8g0774 730 Pfam MCM P-loop domain 294 507 IPR001208 GO:0003677|GO:0005524|GO:0032508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi8g0774 Vvi-Chr8 14236328 14250749 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi8g0774 17 730 Core DNA Replication Machinery Family AT3G09660 69.029 0.0 1068
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g0774 K10737 - vvi:100253345 1385.55