Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g0759 ATGGAAACGAGGCTTCTCCTACTCTTCCTCTCTGTCACTGTTCTTCTCATGGATGCCGCCAATGCTCAGATGCCAGGTTTTGTAAGTTTCGACTGTGGTGGTAGTGAAAATTTCACAGATGACCTTGGTCTTTGGTGGACTTCTGATGATCAATTGATGTATGGAGAAATAGCAACTATATCTGTTGCAAATGAGACACGAAAGCAATATACCACACTGAGGCATTTCCCTGCTGACAACAGGAAGTATTGCTACACACTTGATGTTATAAGCAGGACTAGGTACCTTGTAAGAGCGACTTTCTTGTATGGTAATTTTGACAACAACAAGGTTTATCCAAAGTTTGATATTTCCCTTGGGGCTACTCCTTGGTCTACAATTGTCATTTCGGATGCTAACACAATAGAGTCCAGTGAGTTGATATTCCTGGCTTCAGATCCTACTATTAGTGTGTGTTTATCCAATGCTACAACTGGGCAGCCATTTATCTCTACCCTTGAGCTCCGACAATTCAATGGTTCAATTTACTATACAGAATATGAAGAAGATTTCTTTCTTAGCGTGTCTGCAAGAGTAAATTTTGGTGCAGATAGTGAAGCTCCAGTCAGGTATCCAGATGACCCATTTGATAGAATATGGGAGTCTGACTCCTTGAAGAAAGCAAATTACTTGGTTGATGTTGCTCCTGGCACTGAGAAAGTTTCCACCCAGATGCCAATTGATGTCAATAAAGATAGCAGACCACCGGAAAAAGTGATGCAGACAGCTGTTGTTGGGAGAAATGGTACATTAAGTTACCGATTGAATCTAGATGGGTTTCCAGGTTTTGGATGGGCATTCACCTACCTTGCAGAAATTGAAGATTTGGGCCCAGAAGAAACAAGGAAATTCAGGCTAATACTCCCAAACATGCCTGATCTCAGCAAACCTGCTGTTAATATCCAAGAAAATGCTCAAGGAAAGTATCGTCTGTATGAGCCAGGATACCCCAATATATCTCTCCCCTTTGTATTATCTTTCAAGTTTGGAAAAACATCTGATTCTTCTCAGGGGCCACTTTTGAATGCTATGGAGATAAATAAATATCTGGAGAAACGTGATGGTTGTCTAGATGGATCTGCTATTGCTAGTATAGTTTTACAGTACTCATCAGAAGATTGGGCAAAAGAAGGTGGTGATCCATGCTTGCCAGTTCCATGGTCATGGGTAGCATGCAACTCTGATCCACAACCAAGGATAGTTTCAATTCATTTATCTGGAAAGAATTTGACAGGGAATATTCCCACAGATTTGACAAAGCTGAGTGGCTTAGTAGAGCTATGGCTTGATGGCAATGCACTGGCTGGTCCAATACCTGATTTTACTGGATTGATAAACTTGAAGACCATCCATCTTGAGAACAATCAGCTGTCTGGTGAGCTGCCATCCTCTTTGGTGGACCTTCAGAGTCTAAAGGAACTGTATGTGCAAAATAATATGTTGTCTGGGAAAGTGCCATCAGGTCTTCTCAATGAGAACTTGGATTTCAACTACTCAGGAAATGATAATCTTCATAAAGGGAGCACAGGAGGTAGACACATTGGTATTATCATTGGATCCTCAGTTGGGGCTGTTGTTCTGCTTATAGCTACTATTGCATCTTGCTTATTTATGCACAAAGGAAAGAAAAGATACTATGAACAGGACCAGCTTGGACATGGACTACCTGCTCAAAGGATAGTTTCTTCCTTGAATGATGCTGCCACAGAAGCTGCAAATTGCTTTAGTTTATCTGAAATTGAAGATGCTACAAGGAAATTTGAGAAGAAAATTGGTTCTGGGGGTTTTGGAGTGGTATATTATGGAAAAATGAAAGATGGAAAAGAAATTGCAGTCAAAGTACTAATCAATAACTCCTATCAGGGGAATAGAGAATTTTCAAATGAGGTGACCCTTCTTTCAAGAATCCATCACAGAAACCTGGTACAGTTTCTTGGGTATTGCCAAGAAGAAGGCAGAAGTATGCTTGTTTATGAGTTTATGCATAATGGAACTCTGAAGGAACATCTTTATGGCCCCTTGACACGTGAGCGAGCTATCAGTTGGATCAAGCGCCTTGAGATTGCTGAAGATGCGGCTAAAGGAATTGAGTACCTTCATACAGGATGTGTTCCATCCATCATTCATCGGGATTTGAAAAGTAGCAATATTCTTCTTGACAAATACATGAAAGCAAAGGTTTCAGATTTTGGTCTTTCAAAGCTAGCAGTAGATGGATCATCCCATGTATCGAGTGTGGTTCGTGGCACTGTGGGGTATCTGGATCCTGAGTGGATCTTTTTCTTTCAATGGACAAACTCGAACTAG 2346 0.4092 METRLLLLFLSVTVLLMDAANAQMPGFVSFDCGGSENFTDDLGLWWTSDDQLMYGEIATISVANETRKQYTTLRHFPADNRKYCYTLDVISRTRYLVRATFLYGNFDNNKVYPKFDISLGATPWSTIVISDANTIESSELIFLASDPTISVCLSNATTGQPFISTLELRQFNGSIYYTEYEEDFFLSVSARVNFGADSEAPVRYPDDPFDRIWESDSLKKANYLVDVAPGTEKVSTQMPIDVNKDSRPPEKVMQTAVVGRNGTLSYRLNLDGFPGFGWAFTYLAEIEDLGPEETRKFRLILPNMPDLSKPAVNIQENAQGKYRLYEPGYPNISLPFVLSFKFGKTSDSSQGPLLNAMEINKYLEKRDGCLDGSAIASIVLQYSSEDWAKEGGDPCLPVPWSWVACNSDPQPRIVSIHLSGKNLTGNIPTDLTKLSGLVELWLDGNALAGPIPDFTGLINLKTIHLENNQLSGELPSSLVDLQSLKELYVQNNMLSGKVPSGLLNENLDFNYSGNDNLHKGSTGGRHIGIIIGSSVGAVVLLIATIASCLFMHKGKKRYYEQDQLGHGLPAQRIVSSLNDAATEAANCFSLSEIEDATRKFEKKIGSGGFGVVYYGKMKDGKEIAVKVLINNSYQGNREFSNEVTLLSRIHHRNLVQFLGYCQEEGRSMLVYEFMHNGTLKEHLYGPLTRERAISWIKRLEIAEDAAKGIEYLHTGCVPSIIHRDLKSSNILLDKYMKAKVSDFGLSKLAVDGSSHVSSVVRGTVGYLDPEWIFFFQWTNSN* 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g0759 781 Pfam Malectin-like domain 31 360 IPR024788 -
Vvi8g0759 781 SUPERFAMILY Protein kinase-like (PK-like) 585 775 IPR011009 -
Vvi8g0759 781 SMART serkin_6 598 781 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi8g0759 781 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 410 498 - -
Vvi8g0759 781 SUPERFAMILY L domain-like 398 504 - -
Vvi8g0759 781 Pfam Protein kinase domain 600 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi8g0759 781 ProSitePatterns Protein kinases ATP-binding region signature. 604 626 IPR017441 GO:0005524
Vvi8g0759 781 ProSitePatterns Serine/Threonine protein kinases active-site signature. 720 732 IPR008271 GO:0004672|GO:0006468
Vvi8g0759 781 Gene3D Phosphorylase Kinase; domain 1 573 673 - -
Vvi8g0759 781 Gene3D Transferase(Phosphotransferase) domain 1 674 780 - -
Vvi8g0759 781 FunFam Leucine-rich repeat receptor-like protein kinase 576 673 - -
Vvi8g0759 781 ProSiteProfiles Protein kinase domain profile. 598 781 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi8g0759 781 Gene3D Ribonuclease Inhibitor 376 521 IPR032675 -
Vvi8g0759 781 FunFam Os07g0541700 protein 674 763 - -
Vvi8g0759 781 PANTHER OS07G0107800 PROTEIN-RELATED 457 779 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi8g0759 Vvi-Chr8 14095682 14106278 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi8g0759 19 708 Receptor kinase-like Gene Family AT2G37050 68.857 0.0 1015
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Vvi8g0759 Malectin_like 3e-76 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g0759 - - vvi:100244826 1523.06