Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g0757 ATGAACGGTGATGGAAAGATAGGGTTACCTGATCCGGGTCAGTGCGGGGAAGATGGGAAGGATATTAAAGCTAGGGATGGAGATGAGGTTCCCTCTGCAGACGGCGAAGGTGACGATGTTAGTGATGATGAAGAGTCCATGGATTGTTACGAGGCGTTGGTCCTCATGAAATCTCGTGTTCTGCTGGTGGAAAATGATGATTCTACGCGCTATGTAATCGGTGCTTTGCTTCGCAACTGTGGCTATCAAGTTACAGAAACATCGAATGGATTGCAAGCATGGAGGATATTAAAAGATACAAGCAATCATATTGATCTTGTATTAACTGAGGTGAATTTACCTCGTCTATCAGGTATTGCACTGCTATGCAAGATTATGAACCACAAAACCCGCAAAAATATTCCAGTAATTATGATGTCTACACATGACTCCGGCGCCTTGGTGCTCAAGTGTTTGTCAAAGGGTGCAACCGACTTCCTAGTCAAGCCCGTAAGAAAGAATGAGCTCAAATTCCTTTGGCAACACATTTGGAGGAGGCGCCAAAATAATGGATTTCCTTGCGGAAGTAAAGGAGATACGCAGGATTTAAAGCCAAAGAGTGATGGGGATTCCAATTTTCAACCCCAACAACAGTGA 636 0.4418 MNGDGKIGLPDPGQCGEDGKDIKARDGDEVPSADGEGDDVSDDEESMDCYEALVLMKSRVLLVENDDSTRYVIGALLRNCGYQVTETSNGLQAWRILKDTSNHIDLVLTEVNLPRLSGIALLCKIMNHKTRKNIPVIMMSTHDSGALVLKCLSKGATDFLVKPVRKNELKFLWQHIWRRRQNNGFPCGSKGDTQDLKPKSDGDSNFQPQQQ* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g0757 211 SUPERFAMILY CheY-like 58 181 IPR011006 -
Vvi8g0757 211 ProSiteProfiles Response regulatory domain profile. 59 177 IPR001789 GO:0000160
Vvi8g0757 211 Pfam Response regulator receiver domain 60 170 IPR001789 GO:0000160
Vvi8g0757 211 SMART REC_2 58 173 IPR001789 GO:0000160
Vvi8g0757 211 PANTHER TWO-COMPONENT RESPONSE REGULATOR 59 192 IPR045279 GO:0009736
Vvi8g0757 211 MobiDBLite consensus disorder prediction 184 211 - -
Vvi8g0757 211 MobiDBLite consensus disorder prediction 1 44 - -
Vvi8g0757 211 Gene3D - 56 192 - -
Vvi8g0757 211 MobiDBLite consensus disorder prediction 16 31 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi8g0757 Vvi-Chr8 14073062 14074503 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi8g0757 59 179 Response Regulator Gene Family AT5G60100 69.421 1.73e-56 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Vvi8g0757 Response_reg 7.7e-23 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g0757 K12129 - vvi:100267136 424.091