Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g0751 ATGGAGATTAAAGAGTCTGAGAGGATAGTTGTAGCTAAACCAGTTGCTTCAAGGCCTACCTGTTCCAGTTTTAGGTCTTTCTCTGAGCTCCTTGCAGGTGCCATCAATGCCTCGCCCCCAACCCCATGTCCTGAAACTTCTTTTGCTGCCATTAGACCAAAGACAGTGAGGTTCAAACCTGTGGCAAACCGTGCTCCAATTGGGGTGGTTTCTTCCCAGGCTCAAGTATCTGGAACAGAAGTTTGTAATTCATCTGATAAGGTTTTGAAATCAGACAGCAAACCCACTGTGGTATACAAGCCCTTGGCAAAGCTTGTATCAAAGACAACTGTTTCTCTGCTAGCAAATCTGGGGAGCTCCAATATGAGCCACCAGCAAACACTAGCACAGGTGGAGGCCCGTGTTCAACCTCCAAACCAAGATAGACAACATTCCAGACCTCACCTTAGCTCAAATCTACATCAGACTTTTCCATCTCAAGAAGAAACAGATAGAACAAGCGAGCCCTCTAAGACAGCATCACAGAATCTGGAAGAAGATCAGAAACCTTTGCTGCCCTCAAGCAATGGGGACCGACCTTCCTATGATGGATATAATTGGAGAAAATATGGCCAAAAGCAAGTCAAAGGAAGTGAGTATCCCAGAAGCTACTACAAGTGCACATACCCAAGTTGTCCTGTGAAGAAGAAGGTAGAAAGATCATTGGATGGGCAGATAGCAGAAATTGTCTACAAAGGTGAGCACAATCATTCAAAACCTCAACCTCCTAAACGCAATTCATCAGGGACTCTGGGGCAGGGATTTGTATCTGATGGAACTGGTCAAGATACCAACAACCCAGCATGGGGTACCCGCCTGAATGAGAGGAATGAAGGTTCTGAAGGTAGAATTGAAAATCAGAATGAAGTTGGATTATCCACCCATTCAACATATCCAGGCAAAGCTCCACTAAATTATGATTCTGGTACAACTGGAGCATTAAAGGCAGGTGGTGGTACTCCAGATAATTCTTGTGGTCTTAGTGGAGATTGTGAGGAAGGAAGCAAGGGATTGGAGCCAGAGGAAGATGAACCCAGGAGTAAGAGAAGGAAAAGTGAGAATCAATCCAGTGAAACAGTCATTGTAGGGGAAGGTGCACAAGAACCACGTATTGTTGTGCAAAATTCTACAGATTCTGAGATTCTGGGTGATGGCTTTCGCTGGAGAAAATATGGCCAGAAGGTTGTGAAGGGAAATTCATATCCCAGGAGTTACTATAGATGCACCAGTCTCAAGTGCAATGTGCGCAAGCATGTGGAAAGAGCATCAGAGGACCCAGGGTCATTTATCACAACATACGAGGGAAAACATAACCATGATATGCCAACCAGGAATACAAATGCAGCAACCTCTGAACCAGATATGCAGGCCCATACGAATAAAGAGAAACCATGA 1434 0.4484 MEIKESERIVVAKPVASRPTCSSFRSFSELLAGAINASPPTPCPETSFAAIRPKTVRFKPVANRAPIGVVSSQAQVSGTEVCNSSDKVLKSDSKPTVVYKPLAKLVSKTTVSLLANLGSSNMSHQQTLAQVEARVQPPNQDRQHSRPHLSSNLHQTFPSQEETDRTSEPSKTASQNLEEDQKPLLPSSNGDRPSYDGYNWRKYGQKQVKGSEYPRSYYKCTYPSCPVKKKVERSLDGQIAEIVYKGEHNHSKPQPPKRNSSGTLGQGFVSDGTGQDTNNPAWGTRLNERNEGSEGRIENQNEVGLSTHSTYPGKAPLNYDSGTTGALKAGGGTPDNSCGLSGDCEEGSKGLEPEEDEPRSKRRKSENQSSETVIVGEGAQEPRIVVQNSTDSEILGDGFRWRKYGQKVVKGNSYPRSYYRCTSLKCNVRKHVERASEDPGSFITTYEGKHNHDMPTRNTNAATSEPDMQAHTNKEKP* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g0751 477 ProSiteProfiles WRKY domain profile. 196 253 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vvi8g0751 477 MobiDBLite consensus disorder prediction 245 381 - -
Vvi8g0751 477 MobiDBLite consensus disorder prediction 297 317 - -
Vvi8g0751 477 SMART WRKY_cls 194 252 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vvi8g0751 477 SMART WRKY_cls 395 454 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vvi8g0751 477 Pfam WRKY DNA -binding domain 397 452 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vvi8g0751 477 Pfam WRKY DNA -binding domain 196 250 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vvi8g0751 477 ProSiteProfiles WRKY domain profile. 390 455 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vvi8g0751 477 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 120 470 IPR044810 GO:0003700
Vvi8g0751 477 MobiDBLite consensus disorder prediction 134 183 - -
Vvi8g0751 477 FunFam WRKY transcription factor 184 254 - -
Vvi8g0751 477 Gene3D WRKY domain 184 254 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vvi8g0751 477 Gene3D WRKY domain 380 456 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vvi8g0751 477 MobiDBLite consensus disorder prediction 352 368 - -
Vvi8g0751 477 MobiDBLite consensus disorder prediction 439 477 - -
Vvi8g0751 477 SUPERFAMILY WRKY DNA-binding domain 193 253 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vvi8g0751 477 SUPERFAMILY WRKY DNA-binding domain 390 455 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vvi8g0751 477 MobiDBLite consensus disorder prediction 255 286 - -
Vvi8g0751 477 MobiDBLite consensus disorder prediction 134 199 - -
Vvi8g0751 477 FunFam WRKY transcription factor 384 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi8g0751 Vvi-Chr8 14033688 14036611 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi8g0751 91 454 WRKY Transcription Factor Family AT2G37260 48.684 1.33e-93 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vvi8g0751 WRKY 1e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g0751 - - vvi:100256868 969.918