Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g0748 ATGGCCACTACATGTGTGGAAGAGGTTCTGCCTCCGGTGTTGGATTCTACTTCTGATCAACCTCCTCTCTTTGATGGCACCACAAGGTTGTATATTTCATATTCTTGCCCCTTCGCCCAGCGAGTGTGGATAACCAGGAATTATAAGGGTTTACAAGAACAGATTAAATTGGTTCCTCTTAACCTTCAAAACAGGCCTGCATGGTATAAGGAAAAAGTCTACCCTGGAAATAAGGTGCCTGCACTGGAACACAATAACAAAGTCATTGGAGAGAGTCTTGATTTGATTAAATATGTTGATAGCAACTTTGGAGGGCCTTCACTTTGCCCCGATGGTCCTGGCAAGCGAGAGTTTGCTGAGGAGTTGATCTCCTACACTGATACATTCATCAGAATTGTATATACTTCATTTAAAGGAGACCCAGCAAAAGAAGTTGGTGCTACTTTTGATCATCTAGAAACTGCCCTGCATAAATTTGATGATGGGCCTTTCTTCCTTGGCCAATTCAGTTTGGTGGACATAGCCAACATTCCATTTGTTGAAAAATTCCAAATCTTCTTATCCGAAGTGTGGAAGTATGACATCACAGCTGGCAGGCCTAAACTAGCAGCATGGATCGAGGAGTTGAACAAGATTGGTGCTTATAAGCAAACAAAATGTGATCCCAAAGTAGTCGTTGAAGCTTACACGAAGCTTTTCCTGACCCAGTAA 711 0.4248 MATTCVEEVLPPVLDSTSDQPPLFDGTTRLYISYSCPFAQRVWITRNYKGLQEQIKLVPLNLQNRPAWYKEKVYPGNKVPALEHNNKVIGESLDLIKYVDSNFGGPSLCPDGPGKREFAEELISYTDTFIRIVYTSFKGDPAKEVGATFDHLETALHKFDDGPFFLGQFSLVDIANIPFVEKFQIFLSEVWKYDITAGRPKLAAWIEELNKIGAYKQTKCDPKVVVEAYTKLFLTQ* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g0748 236 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 26 107 IPR004045 -
Vvi8g0748 236 SUPERFAMILY GST C-terminal domain-like 103 232 IPR036282 -
Vvi8g0748 236 CDD GST_C_Lambda 112 229 - -
Vvi8g0748 236 FunFam Lambda class glutathione S-transferase 105 236 - -
Vvi8g0748 236 SUPERFAMILY Thioredoxin-like 21 108 IPR036249 -
Vvi8g0748 236 PANTHER GLUTATHIONE S-TRANSFERASE L1 5 233 IPR044629 GO:0004364
Vvi8g0748 236 FunFam Glutathione S-transferase L2, chloroplastic 1 104 - -
Vvi8g0748 236 Gene3D Glutaredoxin 1 104 - -
Vvi8g0748 236 SFLD Main (cytGST) 29 210 - -
Vvi8g0748 236 Pfam Glutathione S-transferase, C-terminal domain 124 206 IPR041695 -
Vvi8g0748 236 SFLD Glutathione Transferase (cytosolic) 29 210 IPR040079 -
Vvi8g0748 236 Gene3D - 105 236 - -
Vvi8g0748 236 Pfam Glutathione S-transferase, N-terminal domain 30 106 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi8g0748 Vvi-Chr8 14007044 14009564 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi8g0748 11 234 Glutathione S-transferase Gene Family AT5G02790 70.089 6.17e-117 332
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g0748 K00799 - vvi:100246597 489.574