Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g0742 ATGATATCAATCTATTTCATGAAAATGGTTAAACCCTGTTGGAAGCCGTCCGTAGAAGGTGATGGAACTCGCGGAAAAGGAGATTCCAGTGGTCGAGTTGATGGGTTGTTGTGGTATAAGGACCTGGGCCAACATATTAACGGTGAATTCTCAATGGCTGTGATTCAGGCCAATAGTTTGTTGGAGGACCAAAGCCAGCTCGAGTCCGGGCCCTTGAGTTTCCTGGATTCGGGGCCTTATGGGACCTTCATTGGTGTATATGACGGACATGGAGGGCCAGAGGCTTCCCGCTTTGTTAATGAAAACCTCTTCCCCAATCTTAAGAAATTTGCAACCGAGCATCAAGAGATATCGGAAAGTGTTATTAGAAAAGCTTTCTCAGCAACAGAAGAGGGTTTTCTCTCACTTGTGAAGAAGCAGTGGCTCACTAAGCCACAGATTGCATCTGTGGGATCATGTTGTTTGGCAGGAATCATATGCAATGGACTGCTATATATTGCAAATGTTGGAGATTCCCGGGCTGTGCTTGGGAGGGCAGAAAGGGCCAGCAGAGAAGTCACAGCTATTCAGTTATCAACAGAGCACAATGCTAGCATTGAATCTGTGAGGGAAGAACTTCGGTCATTACACCCCCATGATAAACATATTGTGGTCTTAAGACACAAGGTTTGGCGTGTGAAGGGACTCATACAGGTTTCAAGATCCATAGGTGACGCATATCTTAAGAAGGCAGAGTTCAACAGAGAGCCTCTCCTGTCCAGGTTTAGATTGCCTCAACCCTTCATCGAGCCTATCCTTAGCTCAGAACCATCAATATCTGTACACAAAATCCGGCCTGAAGACCAGTTTATCATATTTGCTTCTGATGGCCTGTGGGAGCATCTTAGCAACCAGGAGGCGGTCAACATTGTCAACAATTACCCACGTAATGGAATTGCCCGGAAACTTGTCAAAACTGCACTTCAAGAAGCAGCAAAGAAAAGAGAAATGAGGTACTCTGACCTGAAAAAGATAGACAGAGGGGTGAGGAGACATTTTCACGATGATATCACGGTGGTAGTTGTGTTTCTTGATCCCCTTCTGATCAAAAGGAGCTCCTCCAGCGGTTGCCCGTTCTCGATAAAAGGAGGTGTTAAGGCCCCCGCCCCTGCTGCTGAGGTATAG 1164 0.4639 MISIYFMKMVKPCWKPSVEGDGTRGKGDSSGRVDGLLWYKDLGQHINGEFSMAVIQANSLLEDQSQLESGPLSFLDSGPYGTFIGVYDGHGGPEASRFVNENLFPNLKKFATEHQEISESVIRKAFSATEEGFLSLVKKQWLTKPQIASVGSCCLAGIICNGLLYIANVGDSRAVLGRAERASREVTAIQLSTEHNASIESVREELRSLHPHDKHIVVLRHKVWRVKGLIQVSRSIGDAYLKKAEFNREPLLSRFRLPQPFIEPILSSEPSISVHKIRPEDQFIIFASDGLWEHLSNQEAVNIVNNYPRNGIARKLVKTALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVVVVFLDPLLIKRSSSSGCPFSIKGGVKAPAPAAEV* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g0742 387 CDD PP2Cc 50 357 IPR001932 -
Vvi8g0742 387 ProSitePatterns PPM-type phosphatase domain signature. 83 91 IPR000222 GO:0043169
Vvi8g0742 387 FunFam Phosphatase 2C family protein 38 367 - -
Vvi8g0742 387 PANTHER PROTEIN PHOSPHATASE 37 355 IPR015655 GO:0004722|GO:0006470
Vvi8g0742 387 Pfam Protein phosphatase 2C 82 326 IPR001932 -
Vvi8g0742 387 SUPERFAMILY PP2C-like 74 359 IPR036457 -
Vvi8g0742 387 Gene3D - 40 364 IPR036457 -
Vvi8g0742 387 SMART PP2C_4 39 355 IPR001932 -
Vvi8g0742 387 ProSiteProfiles PPM-type phosphatase domain profile. 49 357 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi8g0742 Vvi-Chr8 13977282 13979548 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi8g0742 3 385 PP2C-type Phosphatase Gene Family AT3G12620 71.948 0.0 574
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g0742 K01102 - vvi:100241474 763.066