Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g0718 ATGCCGAGAAAAGGAATGAGGAGCTTCTTCTTTTCACACAAAGCCGATTCGTCCTCCGCGTCTCACTGCCCTTCACCGTCCCGATCGACAGCCACTCCTTCGATCCCTCGGAGAAGCATTTCCGATGCAGCAATGGCGAAGGGTGTTGAAGAGGCAGAGGCCATGATTATGAAATGGGACGCGGATACTTCAGCCTATGCTAAAGTCACTTCTATCTTTTACGAGAGCAAAAAAGAAGCCCATGATTTTATCAAATGCGTCAATGACTTACAGAAGGCAATGCATTTCATGGTGTCCGAGAACTCCAGCTCCGAGATGGTGGTGCGTGCCCAGCGCTTGATGCAAATTGCCATGAAGAGGCTTCAGAAGGAATTCTATCAGATTCTTTCTACCAACCGCGCTTACTTGGACCCGGAGTCCGTGTCCACTCGATCATCACGTTTGTCAGCAAGATCTAGCACGTCTGACTATGACGATGATGTTGGACCGGAGGATGAGATTCGAACGGCAGGCGATTCCATTTCTGAGGTCGAACAAGTATCTAGTAATGCAATGGATGATCTGAGATCCATAGCCGAATGCATGATCTCGTCCGGCTATGGCAAAGAGTGCGTACGCATATACAAAATTATCCGCAAGTCTATAGTGGACGAAGGAATATATCGTCTTGGAGTCGAAAAATTAAGTTCTTCGCAGATTCATAAGATGGATTGGGAAATCGTGGAGTTGAAGATCAAGAATTGGCTGGAGGGTATTAAGATATCTATAACAACACTCTTCACTGGGGAGAGAATCCTTTGCGATCATGTCTTCGCGGCATCTGACTCCATGCGTGAGTCTTGTTTTGCGGAAATCTCAAAAGAAGGAGCGACTCTTCTGTTTGAATTCCCTAGACTGCTCGTATCGAAAAGTAAGAGATCCCCGGATATGGCGTTCCGTACACTCGACGTGTACACGGCGATATCTGATAATTGGCCGGATATTGAATCGATATTCTCCTTCGAGTCCACTTCTTCTGTTCGTTTACACGCTCTCACCACGCTCAGCAAACTTGGAGAATCAGTACGGATGATGTTGTCCGAGTTCGAATCGGTGATTCAAAAGGACTCGTCCAAATCGCCAGTTGCAGGCGGAGGACTCCATCCTTTGACTCAATACGTGATGAATTACTTGTCTCACCTTGCCGACTATAGCAGCATTCTTGGCGACATCATTGGCGATTCTCCACCGCCAGTTCAGTCGCCTTTGCCGGAGTTCTACTTCGAAAGTTCAGACACCGACAACACTCCGGCGCCAGCCATCTCCGTTCGATTGGCTTGGATTATACTTTTCCTTCTCTGCAAGCTGGATGGCAAAGCAAAGCAGTACAAAGAGGTGTCTTTATCGTATCTCTTCTTAGCGAACAATCTTCAACACGTCGTTTCAAAAGTCCGTACATCGAATCTCCGGTACCTCCTCGGAGACGAGTGGATCTCCATGCATGAATCTAAGCTGAGACAGTTTGCCGCCAACTACGAACGGTTAGGTTGGGGCCACGTCATATCGTCAATGCCGGAGAACCCTAAGGCTGCCATTTCGCCGGAGGAAGCCAAGGAAACTTTCCGGAAATTCAATTTGGAGTTTGAACAAGCGTATCGGAAGCAATCCTCTTATATCGTACCAGACCCGAAACTTCGAGACGAAATAAAAGCTTCCATCGCCAGGAAACTCGACTCGGTGTATCAGGAGTTCTACGAGACCCATCGTGAGACACTGGCCACCATACGAAATGCAGAGATGCTTATCAGATTTGCCCCCGAAGATGTGAGAAATTGCTTATCGGATCTATTTTACGGCACGGGTTCGGGAGATTCTATGAGTGTCTCTTCCACGTCTTCTTCGTCATCCCCACGACGGCGCCACCGCTGA 1908 0.4806 MPRKGMRSFFFSHKADSSSASHCPSPSRSTATPSIPRRSISDAAMAKGVEEAEAMIMKWDADTSAYAKVTSIFYESKKEAHDFIKCVNDLQKAMHFMVSENSSSEMVVRAQRLMQIAMKRLQKEFYQILSTNRAYLDPESVSTRSSRLSARSSTSDYDDDVGPEDEIRTAGDSISEVEQVSSNAMDDLRSIAECMISSGYGKECVRIYKIIRKSIVDEGIYRLGVEKLSSSQIHKMDWEIVELKIKNWLEGIKISITTLFTGERILCDHVFAASDSMRESCFAEISKEGATLLFEFPRLLVSKSKRSPDMAFRTLDVYTAISDNWPDIESIFSFESTSSVRLHALTTLSKLGESVRMMLSEFESVIQKDSSKSPVAGGGLHPLTQYVMNYLSHLADYSSILGDIIGDSPPPVQSPLPEFYFESSDTDNTPAPAISVRLAWIILFLLCKLDGKAKQYKEVSLSYLFLANNLQHVVSKVRTSNLRYLLGDEWISMHESKLRQFAANYERLGWGHVISSMPENPKAAISPEEAKETFRKFNLEFEQAYRKQSSYIVPDPKLRDEIKASIARKLDSVYQEFYETHRETLATIRNAEMLIRFAPEDVRNCLSDLFYGTGSGDSMSVSSTSSSSSPRRRHR* 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g0718 635 Pfam Exo70 exocyst complex subunit 246 608 IPR046364 GO:0000145|GO:0005546|GO:0006887
Vvi8g0718 635 PANTHER EXOCYST COMPLEX PROTEIN EXO70 41 611 IPR004140 GO:0000145|GO:0006887
Vvi8g0718 635 MobiDBLite consensus disorder prediction 616 635 - -
Vvi8g0718 635 Gene3D Exocyst complex component Exo70 55 618 - -
Vvi8g0718 635 MobiDBLite consensus disorder prediction 16 37 - -
Vvi8g0718 635 SUPERFAMILY Cullin repeat-like 48 610 IPR016159 -
Vvi8g0718 635 MobiDBLite consensus disorder prediction 145 166 - -
Vvi8g0718 635 FunFam Exocyst subunit Exo70 family protein 66 618 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi8g0718 Vvi-Chr8 13769749 13771656 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi8g0718 37 614 EXO70 exocyst subunit family AT3G09520 56.581 0.0 659
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g0718 K07195 - vvi:100267121 1178.31