Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g0710 ATGGGCACAGCAACCTTCCTGGAAGTCTTGCTGGCCATTCTCCTTCCCCCTGTCGGCGTCTTCCTCCGCTATGGCTGTGGGGTGGAGTTCTGGATAGACTTGCTGCTGACCATTCTGGGCTACATTCCAGGAATCCTATATGCGCTCTATGTGCTGGTTGCTTTATAG 168 0.5357 MGTATFLEVLLAILLPPVGVFLRYGCGVEFWIDLLLTILGYIPGILYALYVLVAL* 56
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g0710 55 PANTHER HYDROPHOBIC PROTEIN RCI2 LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN LTI6 -RELATED 3 54 IPR000612 GO:0016020
Vvi8g0710 55 Pfam Proteolipid membrane potential modulator 6 53 IPR000612 GO:0016020
Vvi8g0710 55 ProSitePatterns Uncharacterized protein family UPF0057 signature. 10 25 IPR000612 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi8g0710 Vvi-Chr8 13688099 13688337 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi8g0710 1 54 RCI2 Gene Family AT2G38905 85.185 2.29e-27 91.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g0710 - - vvi:100261866 112.464