Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g0697 ATGACTTTCTCAATCTTCACCAAACTAATGCTGCTCAGCTTATTGGAGCCAGTTATTGACCAAAATTTGTATTATTTCGGGTTGAAGTACACAACAGCAACATTTGCAGCCGCTATGTACAACATTCTTCCAGCCATAACCTTTTTAATGGCTTGCATCTTTGGGCTTGAGAAGGTAACACTTAAGAGTATCCACAGCCAAGCTAAGGTGGTTGGTACTGTAGCAACTGTTGCAGGAGCTATGCTCATGACACTGGTAAAAGGCCCAGTTATTGAGTTGATTTGGACAAAAGGAAGAAACAACCAAGGGGTTAAAGGTGGTGGAACAAATATTCACGACTCAATCAAGGGTTCCCTCATGATCACAGCCGGCTGCTTCAGCTGGGCTTGTTTCATAATTCTACAAGCGATCACGCTAAAAACATACCCGGCTGAGCTTTCTCTCACTGCTTGGATATGCCTGTTGGGCACAGCACAAGGCACCATAGTGGCACTTGTTATGGAACGGGGAAAAACTAGTGTCTGGTCTATACACTGGGACACTAAATTCCTGGCAGCTCTATACAGTGGCATAGTCTGTTCAGGGCTAGCTTATTACATTCAAGGAGTAGTAATGAAAGACAGGGGACCGGTTTTTGTGACTGCTTTCAATCCACTAAGCATGATAATTGTTGCTGTCATGAGCTCTTTCATTTTGGCTGAACAAATGTACTTGGGAAGGGTAATCGGTGCCATTGTCATAGTAGCTGGCCTATACTTTGTCGTGTGGGGTAAAAGCAAGGAGTACAAATCTGGATCCCCCTCAACAGATGGACAAATGGTCCAAGACAAACAAATGACAGACGCAAGCAGTGATAGCAATGAAAATTCTACTCCTGAGGTGATTACGCTCAATGTTTCAAGCAGAGGTGGGGCAACTAGAGATGAACAAATAAATAGACAGAGAGATCAGCTACTTGTCTAG 963 0.4372 MTFSIFTKLMLLSLLEPVIDQNLYYFGLKYTTATFAAAMYNILPAITFLMACIFGLEKVTLKSIHSQAKVVGTVATVAGAMLMTLVKGPVIELIWTKGRNNQGVKGGGTNIHDSIKGSLMITAGCFSWACFIILQAITLKTYPAELSLTAWICLLGTAQGTIVALVMERGKTSVWSIHWDTKFLAALYSGIVCSGLAYYIQGVVMKDRGPVFVTAFNPLSMIIVAVMSSFILAEQMYLGRVIGAIVIVAGLYFVVWGKSKEYKSGSPSTDGQMVQDKQMTDASSDSNENSTPEVITLNVSSRGGATRDEQINRQRDQLLV* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g0697 320 SUPERFAMILY Multidrug resistance efflux transporter EmrE 8 85 - -
Vvi8g0697 320 PANTHER WAT1-RELATED PROTEIN 1 268 IPR030184 GO:0016020|GO:0022857
Vvi8g0697 320 MobiDBLite consensus disorder prediction 263 320 - -
Vvi8g0697 320 MobiDBLite consensus disorder prediction 263 307 - -
Vvi8g0697 320 Pfam EamA-like transporter family 116 255 IPR000620 GO:0016020
Vvi8g0697 320 SUPERFAMILY Multidrug resistance efflux transporter EmrE 165 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi8g0697 Vvi-Chr8 13549253 13551128 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi8g0697 1 312 Nodulin-like Gene Family AT2G37460 63.898 3.09e-140 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g0697 - - vvi:100246483 626.32