Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g0687 ATGGTGAATAATAGTATAGATGTTCTCAACAGGTTTGAGGAGTATAGGGAAATGGTGAAATCCAAGGCCAAAGAAAACAGTGTCGGTTTAGGATTGGAAAGATTGGTGGCTGATGGGAATGAGCTTTTACTGTTTCATGGCGTGGTCATTACTTGTGCATTAGGGTCTGATAAGGGGGCTTTGGGCATTTGCAGCAAGAAACGTTGTGGGGTTTGTAGAGTTATTGGTTCAAACTTTTTCGTTAGAGAAGATACAGCAAGAACAACAACATCATTGTGTGGGAATAGTTGGAGAGCTCATGAGAAAGTGGCTACTGAATGTATTGCCAATGGCGTGTCTCCAGCTACAAGGAAGGGCATCATATTGTGTAAAGTAATAGCCGGCCGAGTTGTTCGTGCTCCCAAGTTTGGGCTCATGGATGGAGAAAAGGGAGGATTTGATTCTGTGGTGAGTTCAACTGGGGATCAACCGGACGGTTCACAAGATCTCATGGTTTTAAATCCAAGGGCTATCCTTCCGTGCTTTGTGATAATCTACAATGTGTGCAAAGGTACCATGTTTCAATAA 567 0.4321 MVNNSIDVLNRFEEYREMVKSKAKENSVGLGLERLVADGNELLLFHGVVITCALGSDKGALGICSKKRCGVCRVIGSNFFVREDTARTTTSLCGNSWRAHEKVATECIANGVSPATRKGIILCKVIAGRVVRAPKFGLMDGEKGGFDSVVSSTGDQPDGSQDLMVLNPRAILPCFVIIYNVCKGTMFQ* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g0687 188 Gene3D - 2 181 - -
Vvi8g0687 188 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 2 179 - -
Vvi8g0687 188 SUPERFAMILY ADP-ribosylation 33 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi8g0687 Vvi-Chr8 13461273 13461839 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi8g0687 2 181 C2H2 Transcription Factor Family AT2G29660 36.842 2.90e-28 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g0687 - - vvi:104880052 381.333