Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g0672 ATGCTCTCGTCACGATCTGTTGCTTCCCTTGTTTTCTTTTACTTGGAAAATATGGTCAAAGACGCAGAAGCCAAAGGTTTTAACCCTGGATTGATAGTGCTGCTTCTTGTTGTTGGGGTGCTATTAGTATTCCTTGTTGGGAATTTTCTTCTTTACATGTATGCACAGAAGACCCTTCCTCGGATGAAAAAGAAACCGGTCTCCAAGAAGAAGATGAAGAGGGAGAGACTGAAGCAAGGTGTCTCAGCACCAGGGGAGTAG 261 0.4406 MLSSRSVASLVFFYLENMVKDAEAKGFNPGLIVLLLVVGVLLVFLVGNFLLYMYAQKTLPRMKKKPVSKKKMKRERLKQGVSAPGE* 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g0672 86 PANTHER DNA-BINDING PROTEIN S1FA2 13 86 IPR006779 GO:0003677|GO:0005634|GO:0006355
Vvi8g0672 86 Pfam DNA binding protein S1FA 22 86 IPR006779 GO:0003677|GO:0005634|GO:0006355
Vvi8g0672 86 MobiDBLite consensus disorder prediction 62 76 - -
Vvi8g0672 86 MobiDBLite consensus disorder prediction 61 86 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF S1Fa-like Vvi8g0672 S1FA 3.2e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g0672 - - vvi:100241470 110.153