Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g0671 ATGTTGATTCTTTCAGGCGAATTTTACAGCATTATTTTTCTCTGTTTGCCTCTGCTTCTCTGTTTCTCCGGTGATGTTCTCACCGCCGGCTCGACTGAATTCGACTTCGGGACGTTGACTCTGAGCAGTTTGAGGCTTCTCGGGGACGCTCATTTGAGTAATGGGAGCGTGAGGCTCACACGAGACCTTGCCGTTCCCAACTCCGGCGCCGGGAGGGTTCTGTATAGTAAGCCGGTGAGATTCCGTCAGCCGGACAGTCATGTTACTGCGAGTTTCTCGACTTTCTTCTCCTTCTCTGTCATAAATCTCAACCCATCTTCAATCGGCGGTGGACTCACGTTTCTCATTTCCCCGGACGACGAAGCCGTCGGTGAGGCCGGCGGATTCCTTGGACTCATCGATATGAAGGGTCTCTCCTCGGGCTTCGTTGCAGTAGAATTCGACACTCTCATGGACGTGGAGTTTAAAGACATTAATGGAAATCATGTGGGACTAGATCTGAACAGCATGGTATCTTCGCAGGTTGGCGATTTGGGAGCCATCGGAATCGATCTTAAAAGCGGCGATCTCGTGAACGTGTGGGTCGAATACGACGGGTCAACTCAGTTGTTCAACATATCAGTGTCTTACTCCAATCTCAAACCCAAAGAACCCCTTTTGTCTTTCGATCTTGATCTGGATCAGTACGTGAACGATTTCATGTTTGTTGGGTTCTCCGGGTCGACTCAGGGCAGCACAGAGATTCACAATATCGAGTGGTGGAGCTTCAGTTCATCTTTTGATGTGGTCTCGGCCACTGGGTCATCATCTCCACCACCTCCAACGGCTAGTTTGATGAATCCAACGGCTAATTCAGTGATCCCACCGCCACCACCATCTATGGCTCCTTCTGCTTCTGATTCAGTCTCTCATACGGCTAAGCCGTCTTCATGCCATAACCAGCTATGTAAGCAAGGACCAGGCGCTGTTGCAGGAGTGGTAACAGCGGGAGCTTTTCTTGTTCTGTTTGCTGGTGTTCTTATCTGGGTATTCTCTAAAAAATTCAAACATGTGAAGAAATCCGAGTCTCTGGCGTCAGATGTCATCAAAATGCCTAAAGAATTCACCTACAAGGAGCTCAAGTCTGCAACAAAATGCTTCAATTCGACTAGAATTATCGGGCACGGCGCGTTTGGGACGGTCTATAAGGGTATAATACCGGACACAGGCGACATTATCGCGGTGAAGAGATGTAGCCATAGCACCCAGGGAAAGAACGAATTTTTGTCTGAGTTATCCATAATTGGAAGTCTCAGGCATAGGAATCTCGTCAGGCTTCAAGGTTGGTGCCACGAGAAAGGTGAAATTCTGTTGGTCTATGATTTGATGCTGAATGGGAGTCTTGATAAAGCCCTGTTTGAAGCCAGAACACCTTTGCCATGGTCCCATAGAAGAAAGATCCTAATGGGCGTTGCCTCTGCTCTGGCCTACTTGCACGAAGAATGTGAAAACCAGGTCATCCACAGAGATATCAAGACCAGCAACATAATGTTGGACGAAGGCTTCAATGCCCGGTTAGGAGATTTCGGCTTGGCAAGGCAAATTGAGCACGATAAGTCGCCGGACGCAACAGTCGCAGCCGGAACAATGGGGTACCTGGCCCCTGAGTATCTCCTCACTGGAAGAGCAACTGATAAGACCGACGTGTTCAGCTACGGAGCCGTGGTTCTAGAGGTGGCCAGTGGAAGGCGGCCCATTGAGAAAGACACAAGTGGGGTTGGAAAAAATTTAGTGAGCAGCAATTTGGTGGAATGGGTGTGGAGTTTACACAGAGAAGGAAGGCTGTTGACCGCAGCAGACGCAAGGCTTGGAGGAGAGTTCGAGGAGGGAGAAATGAGGAGGGTGCTGATGGTTGGACTGTCTTGCTCACACCCAGACCCAAACGCTAGACCCACAATGAGGGGCGTGGTCCAGATGCTGGTGGGCGAGGCTGAAGTCCCCATTGTCCCAAGAGCAAAGCCTTCCATGAGTTTCAGCACATCCCATCTCTTGCTGAGCTTGCAGGACAGTGTGTCCGACTTCAATGGCATGATCACTATCTCCACCTCCTCATCTGATCACAGCTTCAACGGAGGTGCGGAACCGGTGTGA 2130 0.5 MLILSGEFYSIIFLCLPLLLCFSGDVLTAGSTEFDFGTLTLSSLRLLGDAHLSNGSVRLTRDLAVPNSGAGRVLYSKPVRFRQPDSHVTASFSTFFSFSVINLNPSSIGGGLTFLISPDDEAVGEAGGFLGLIDMKGLSSGFVAVEFDTLMDVEFKDINGNHVGLDLNSMVSSQVGDLGAIGIDLKSGDLVNVWVEYDGSTQLFNISVSYSNLKPKEPLLSFDLDLDQYVNDFMFVGFSGSTQGSTEIHNIEWWSFSSSFDVVSATGSSSPPPPTASLMNPTANSVIPPPPPSMAPSASDSVSHTAKPSSCHNQLCKQGPGAVAGVVTAGAFLVLFAGVLIWVFSKKFKHVKKSESLASDVIKMPKEFTYKELKSATKCFNSTRIIGHGAFGTVYKGIIPDTGDIIAVKRCSHSTQGKNEFLSELSIIGSLRHRNLVRLQGWCHEKGEILLVYDLMLNGSLDKALFEARTPLPWSHRRKILMGVASALAYLHEECENQVIHRDIKTSNIMLDEGFNARLGDFGLARQIEHDKSPDATVAAGTMGYLAPEYLLTGRATDKTDVFSYGAVVLEVASGRRPIEKDTSGVGKNLVSSNLVEWVWSLHREGRLLTAADARLGGEFEEGEMRRVLMVGLSCSHPDPNARPTMRGVVQMLVGEAEVPIVPRAKPSMSFSTSHLLLSLQDSVSDFNGMITISTSSSDHSFNGGAEPV* 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g0671 709 Gene3D - 30 268 - -
Vvi8g0671 709 Pfam Legume lectin domain 32 262 IPR001220 GO:0030246
Vvi8g0671 709 FunFam L-type lectin-domain containing receptor kinase VIII.1 30 270 - -
Vvi8g0671 709 ProSitePatterns Legume lectins beta-chain signature. 143 149 IPR019825 -
Vvi8g0671 709 SUPERFAMILY Concanavalin A-like lectins/glucanases 31 270 IPR013320 -
Vvi8g0671 709 Gene3D Transferase(Phosphotransferase) domain 1 456 674 - -
Vvi8g0671 709 SUPERFAMILY Protein kinase-like (PK-like) 362 689 IPR011009 -
Vvi8g0671 709 ProSitePatterns Serine/Threonine protein kinases active-site signature. 499 511 IPR008271 GO:0004672|GO:0006468
Vvi8g0671 709 SMART serkin_6 380 653 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi8g0671 709 CDD STKc_IRAK 386 653 - -
Vvi8g0671 709 MobiDBLite consensus disorder prediction 274 296 - -
Vvi8g0671 709 ProSitePatterns Protein kinases ATP-binding region signature. 386 409 IPR017441 GO:0005524
Vvi8g0671 709 FunFam L-type lectin-domain containing receptor kinase VIII.1 344 455 - -
Vvi8g0671 709 ProSiteProfiles Protein kinase domain profile. 380 662 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi8g0671 709 FunFam L-type lectin-domain containing receptor kinase VIII.1 456 671 - -
Vvi8g0671 709 Pfam Protein kinase domain 381 651 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi8g0671 709 PANTHER - 59 663 - -
Vvi8g0671 709 CDD lectin_legume_LecRK_Arcelin_ConA 48 254 IPR001220 GO:0030246
Vvi8g0671 709 Gene3D Phosphorylase Kinase; domain 1 342 455 - -
Vvi8g0671 709 MobiDBLite consensus disorder prediction 267 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi8g0671 Vvi-Chr8 13315179 13317308 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi8g0671 16 688 Receptor kinase-like Gene Family AT3G53380 71.701 0.0 955
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Vvi8g0671 Pkinase 2.4e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g0671 - - vvi:100267116 1318.52