Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g0670 ATGGTTAAGTCATGCGATGCCTCGCTCTTGCTGGAGACAGCGAGGGGCGTAGAGTCGGAGAAGCTTTCTTCCAGGAGCTTTGGGATGAGAAATTTCAAGTACATCGACACAATAAAAAAGGCTGTCGAGAGTGAGTGCCCACAGACGGTTTCCTGTGCTGATATTGTGGTCCTTTCTGCAAGAGATGGCTTTGAGTTGTTAGGAGGACCATACATTGAAATGAAGACCGGGCGACGAGACAGCAAGGAAAGCTATGCAACAGTGGTAGAAGACTCCATCCCTAATCACAATGATTCCATGTCATTAGTCCTCTCCCGCTTTCAATCCATTGGCATCGATGCCGAAGGGACTGTTGCGCTTTTAGGAGCTCACTCAGTTGGTCGAGTACACTGTGTGAATGTCGTAAATAGGCTCTACCCCACAGTGGACCCAACCTTGGATCCTGAGTATGCTGAATACCTTGAACGCCGGTGCCCTTCGCCGGAACCTGACCCAAAGGCAGTGCAGTATGCAAGGAACGATCTAGAAACGCCAATGGTGCTTGATAATATGTATTACAAGAACATTTTGAGCCACAAGGGACTACTATTAGTTGATCAACAACTCGTTTCAGACCCAACTACATCTCCCTTTGTGGAGAAGATGGCTGATGACAATGGCTACTTCCATGACCAGTTCTCTAGGGCTCTGCTCTTGTTATCTGAGAATAACCCTCTTACCGGAGACGACGGAGAGATTAGGAAGGACTGCCGCTATGTGAATGTATAG 768 0.4792 MVKSCDASLLLETARGVESEKLSSRSFGMRNFKYIDTIKKAVESECPQTVSCADIVVLSARDGFELLGGPYIEMKTGRRDSKESYATVVEDSIPNHNDSMSLVLSRFQSIGIDAEGTVALLGAHSVGRVHCVNVVNRLYPTVDPTLDPEYAEYLERRCPSPEPDPKAVQYARNDLETPMVLDNMYYKNILSHKGLLLVDQQLVSDPTTSPFVEKMADDNGYFHDQFSRALLLLSENNPLTGDDGEIRKDCRYVNV* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g0670 255 CDD secretory_peroxidase 2 253 IPR033905 GO:0004601|GO:0042744
Vvi8g0670 255 PANTHER - 1 254 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi8g0670 255 ProSiteProfiles Plant heme peroxidase family profile. 1 254 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi8g0670 255 PRINTS Plant peroxidase signature 68 83 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi8g0670 255 PRINTS Plant peroxidase signature 115 127 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi8g0670 255 PRINTS Plant peroxidase signature 188 205 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi8g0670 255 PRINTS Plant peroxidase signature 49 59 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi8g0670 255 PRINTS Plant peroxidase signature 172 187 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi8g0670 255 PRINTS Plant peroxidase signature 30 43 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi8g0670 255 PRINTS Plant peroxidase signature 228 241 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi8g0670 255 PRINTS Haem peroxidase superfamily signature 50 67 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi8g0670 255 PRINTS Haem peroxidase superfamily signature 68 80 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi8g0670 255 PRINTS Haem peroxidase superfamily signature 174 189 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi8g0670 255 PRINTS Haem peroxidase superfamily signature 116 131 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi8g0670 255 SUPERFAMILY Heme-dependent peroxidases 2 254 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vvi8g0670 255 FunFam Peroxidase 94 233 - -
Vvi8g0670 255 Gene3D - 1 254 - -
Vvi8g0670 255 Pfam Peroxidase 2 218 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi8g0670 255 Gene3D Peroxidase, domain 2 94 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi8g0670 Vvi-Chr8 13312086 13313113 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi8g0670 1 254 Peroxidase AT2G37130 74.902 3.78e-143 401
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g0670 K00430 - vvi:100256842 514.227