Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g0663 ATGACCGTGATCGACATTCTCACCAGAGTCGACGCGATCTGCAAGAAATACGACAAGTACGACATCGACAAGCAGAAGGATCTCAATGTCTCCGGCGATGATGCCTTCGCTCGTCTTTACGCCGTCGTTGAAGCCGACATCGAGGCCGCTCTTCAGAAAGCAGATACTGCATCTAACGAGAAAAATAGAGCGTCTGCGGTTGCTTTGAACGCCGAGATTCGTCGGACCAAGGCTCGATTGCTGGAGGAGGTCCCTAAGTTGCAGAGACTGGCTATAAAGAAGGTTAAAGGGCTTTCAACAGAAGAACTTGCTGCTCGTAATGATTTGGTCCTTGCATTGCCGGATAGGATCCAAGCAATACCAGATGGGGCTGCAACTGCACCCAAACAAACTGGAGGTTGGGCAGCTTCAGCTTCTCGTACAGAAATCAAATTTGATTCAGATGGACGATTTGACAGTGAATACTTCCAACAAACTGAAGAGTCTAGTCAGTTCAGGCAAGAGTATGAAATGCGGAAAATGAACCAAGACCAAGGTTTGGATGTGATAGCAGAAGGTTTGGACACATTGAAAAACATGGCCCATGATATGAATGAGGAATTGGATCGGCAAGTTCCTTTGATGGATGAGATCGACACCAAGGTGGACAAAGCAACAGCTGACCTCAAGAATACTAATGTTAGACTTAAGGACACTGTTAACCAGCTGAGGTCCAGTCGAAATTTCTGCATTGATATTATTTTGTTGTGTATAATTCTGGGAATTGCTGCCTATCTATATAATGTATTGAAGAAGTGA 798 0.4511 MTVIDILTRVDAICKKYDKYDIDKQKDLNVSGDDAFARLYAVVEADIEAALQKADTASNEKNRASAVALNAEIRRTKARLLEEVPKLQRLAIKKVKGLSTEELAARNDLVLALPDRIQAIPDGAATAPKQTGGWAASASRTEIKFDSDGRFDSEYFQQTEESSQFRQEYEMRKMNQDQGLDVIAEGLDTLKNMAHDMNEELDRQVPLMDEIDTKVDKATADLKNTNVRLKDTVNQLRSSRNFCIDIILLCIILGIAAYLYNVLKK* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g0663 265 ProSitePatterns Syntaxin / epimorphin family signature. 176 215 IPR006012 GO:0005484|GO:0006886|GO:0016020
Vvi8g0663 265 Coils Coil 40 67 - -
Vvi8g0663 265 PANTHER SYNTAXIN 46 252 IPR045242 -
Vvi8g0663 265 SUPERFAMILY SNARE fusion complex 165 230 - -
Vvi8g0663 265 FunFam Putative syntaxin-71-like 170 231 - -
Vvi8g0663 265 SMART tSNARE_6 165 232 IPR000727 -
Vvi8g0663 265 CDD SNARE_Qc 176 230 - -
Vvi8g0663 265 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 170 232 IPR000727 -
Vvi8g0663 265 Coils Coil 215 235 - -
Vvi8g0663 265 Gene3D - 170 231 - -
Vvi8g0663 265 Pfam SNARE domain 207 256 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi8g0663 Vvi-Chr8 13239904 13250981 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi8g0663 1 264 SNARE and Associated Proteins AT3G09740 79.323 4.05e-160 443
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g0663 K08506 - vvi:100258582 496.893