Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi8g0643 | ATGAAGTTCTCTTTTTCTTTCTCAAATTGCTTCTCCCCATCATCACCGCCTGAAGTTGATCGAAGCAGCAGCAGCGGGCAAGAAACAGGAGGAAACACTAGTGAAAAATTTCAAGTCTTCTCTTATAAAGAATTGAAAATCGCCACAGATAGCTTCCACCCATCAAACAAGATTGGTGAAGGAGGCTTTGGTTCTGTCTACAAGGGCCAGCTAAGAGATGGGACCACAGTGGCTGTAAAGGTGCTTTCAGTTGAAATTGAATCGATGCGAGGGGAGAGGGAGTTTGTCTCTGAGTTATCCGCACTGACAGATATCAAGCATGAAAATCTGGTTACCCTTCAAGGATGTTGCGTCGAGGGAGCTAGCAGATTTTTGGTTTATGATTATATGGAGAACAATAGCCTTGCACAAACCTTACTTGGTGCAAAGCAGAACAGGATGGAATTTGGTTGGGAAGCAAGGCGGGGCATTTCACTGGGAGTAGGTCGGGGACTCGCCTATCTCCATGAGGAAGTTCAACCCCATATCATACATCGGGATATTAAGGCTGCCAATATACTTCTAGATCAGAATCTCGCCCCCAAAATCTCAGATTTTGGCTTATCAAAGCTGTTTGTAGATAGCAGATCTCATATTAGTACTCGTGTTGCCGGGACATTAGGCTATCTTGCTCCAGAATATGCTCTTAGCGGGCGTTTGACAAGAAAATCAGATGTTTACAGTTTTGGAGTGCTCCTCCTTGAAATTATCAGTGGCCACTCAGTCGTGGAATATGACTTAGAACACGGCGAACATTATTTGGTCGAAAAGGCATGGGAAATGTACACGGATAACAAACTTCTGCAGCTAGTCGACCCCACGCTAAAGGACTTCCCTGAAGAAGAAGCTATTCAATTCTTAAAGGTGGGCCTACTTTGTGTGCAAGAGATCAGCGGCCTTCGCCCCCGAATGTCAGCAGCCGTGAAGATGTTGACTAATGAGATCAATGTTAATGATGTTCATATATCACAACCGGGACTTCTTTCAGATCTCACCGCCGTTAAAATAGGCCACAGGCGCTCTTTTCCAACCATTTCCTCCAAGGCCTCCACCAGTACCAGCACGCAGAGCGCCAACACAAACCCATCCTTGACTGGGAGCTCTGGTCCCCTTAACATGGATGCTGTATTATTTGATGTTAAATCTGAGTCTCATAGATAG | 1200 | 0.4533 | MKFSFSFSNCFSPSSPPEVDRSSSSGQETGGNTSEKFQVFSYKELKIATDSFHPSNKIGEGGFGSVYKGQLRDGTTVAVKVLSVEIESMRGEREFVSELSALTDIKHENLVTLQGCCVEGASRFLVYDYMENNSLAQTLLGAKQNRMEFGWEARRGISLGVGRGLAYLHEEVQPHIIHRDIKAANILLDQNLAPKISDFGLSKLFVDSRSHISTRVAGTLGYLAPEYALSGRLTRKSDVYSFGVLLLEIISGHSVVEYDLEHGEHYLVEKAWEMYTDNKLLQLVDPTLKDFPEEEAIQFLKVGLLCVQEISGLRPRMSAAVKMLTNEINVNDVHISQPGLLSDLTAVKIGHRRSFPTISSKASTSTSTQSANTNPSLTGSSGPLNMDAVLFDVKSESHR* | 400 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi8g0643 | 399 | MobiDBLite | consensus disorder prediction | 1 | 33 | - | - | |
Vvi8g0643 | 399 | ProSiteProfiles | Protein kinase domain profile. | 52 | 377 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi8g0643 | 399 | FunFam | Serine/threonine-protein kinase receptor | 22 | 129 | - | - | |
Vvi8g0643 | 399 | Pfam | Protein kinase domain | 53 | 302 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi8g0643 | 399 | PANTHER | CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 | 35 | 369 | - | - | |
Vvi8g0643 | 399 | ProSitePatterns | Protein kinases ATP-binding region signature. | 58 | 80 | IPR017441 | GO:0005524 | |
Vvi8g0643 | 399 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 176 | 188 | IPR008271 | GO:0004672|GO:0006468 | |
Vvi8g0643 | 399 | SUPERFAMILY | Protein kinase-like (PK-like) | 32 | 324 | IPR011009 | - | |
Vvi8g0643 | 399 | FunFam | Putative LRR receptor-like serine/threonine-protein kinase | 130 | 336 | - | - | |
Vvi8g0643 | 399 | Gene3D | Transferase(Phosphotransferase) domain 1 | 130 | 337 | - | - | |
Vvi8g0643 | 399 | MobiDBLite | consensus disorder prediction | 358 | 383 | - | - | |
Vvi8g0643 | 399 | CDD | STKc_IRAK | 58 | 326 | - | - | |
Vvi8g0643 | 399 | SMART | serkin_6 | 52 | 300 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi8g0643 | 399 | Gene3D | Phosphorylase Kinase; domain 1 | 18 | 129 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vvi8g0643 | Vvi-Chr8 | 13018307 | 13020215 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vvi8g0643 | 40 | 345 | Receptor kinase-like Gene Family | AT1G56120 | 52.941 | 9.31e-104 | 325 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Vvi8g0643 | Pkinase | 9.4e-48 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi8g0643 | - | - | vvi:100255008 | 755.747 |