Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g0618 ATGAGGGGGAAATTTCTGAGGGCATGCCTGGAAAAGTGGCGGAGAATGGGGAGCAGAGTGATACCATCAGCAGGGTGCGACTACTGCTGCCAGTGGGCACTGTGGCCTTCCATGCACGAAGGCGACTCCATTCCAAGAGATGTCCCAAAGGGACACTTAGTAGTGTATGTGGGTGAAAATTACACGAGGTTTGTCATTAAAATAACTCTGCTCAAGCACCCACTCTTCAAGGCATTGTTGGATCAGGCTCGGGACGAGTATGATTTCACTGCTGCCTCCAAACTCTGTATCCCTTGCGACGAGAACATTTTTCTGAGCGTGGTTCGATGCGCCAGCTCTCCTCAGGATCGAAGATCCTTCTCTTTGTGCCTTTGA 375 0.5067 MRGKFLRACLEKWRRMGSRVIPSAGCDYCCQWALWPSMHEGDSIPRDVPKGHLVVYVGENYTRFVIKITLLKHPLFKALLDQARDEYDFTAASKLCIPCDENIFLSVVRCASSPQDRRSFSLCL* 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g0618 124 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 31 106 IPR003676 GO:0009733
Vvi8g0618 124 Pfam Auxin responsive protein 40 109 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi8g0618 Vvi-Chr8 12797230 12797604 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi8g0618 31 118 Calmodulin-binding Proteins AT4G34750 39.785 1.25e-18 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g0618 K14488 - vvi:100253355 265.774