Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g0590 ATGTCTGATGCCAAGAGAACTGGGGAAGAAAGCAGAGGCCTAATGAAGCTTGAGCATTTCATTAGAAAACTTCAGCTGGTTCTCTCACTCGTACCATCTAAAAGGATGGTGGTTCAGGATGATGTTGAGTATGATGAAGAACTGGAAGCAGCAACAATGGTGCCGGATGATGTAAAGGAAGGCCATTTTGCAGTCTGGGCGGTTATGGGTGGAGAGCCAAAGAGGTTCATTGTTGATTTGTGCTACCTTACTAATCCTGCATTCTTAAGGTTGCTGGAGCAAGCTGAAGAAGAATATGGATTTGAACAGAAGGGAACTCTTGCAGTCCCTTGTCAACCGGAAGAGTTACAGAAGATTCTGCAACCCAGGAGAGAGCCAACTGCAATGGCTAGAAGGTGGGCTACCTGTAAATTATAA 417 0.4508 MSDAKRTGEESRGLMKLEHFIRKLQLVLSLVPSKRMVVQDDVEYDEELEAATMVPDDVKEGHFAVWAVMGGEPKRFIVDLCYLTNPAFLRLLEQAEEEYGFEQKGTLAVPCQPEELQKILQPRREPTAMARRWATCKL* 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g0590 138 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 39 119 IPR003676 GO:0009733
Vvi8g0590 138 Pfam Auxin responsive protein 52 120 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi8g0590 Vvi-Chr8 12519076 12519492 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi8g0590 33 121 Calmodulin-binding Proteins AT5G20810 39.326 1.58e-15 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g0590 - K14488 vvi:100255176 280.796