Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g0589 ATGAGGAGGAGAGGAGGTGCATTGGTGCTAAGGCTTGTCAGGAAGATGCTAACAAGAGTCTTTACGTTTTCAAGAAGATCAAATTTCACTGTCAGAGCTGCTGCTGCTGCTGTTGATGATGATTGTGATGACGATATGGGTCCATTGCCAGAGGATGTGAAGGAGGGACACTTTGTGGTTCAGACCATCTATGATGGTGAACTAAAGAGATTTGTCATTGAATTGGGATATTTGGCTCATCCAGGTTTCTTGAAGTTGTTAGAGCTGGCCGAGGAGGAATTTGGGTTTGAACAAGAGGGAGTTCTTGCTGTTCCCTGTGGTCCAAGTGAGCTCTTGAGGATTCTTGAAACCTGA 354 0.452 MRRRGGALVLRLVRKMLTRVFTFSRRSNFTVRAAAAAVDDDCDDDMGPLPEDVKEGHFVVQTIYDGELKRFVIELGYLAHPGFLKLLELAEEEFGFEQEGVLAVPCGPSELLRILET* 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g0589 117 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 33 114 IPR003676 GO:0009733
Vvi8g0589 117 Pfam Auxin responsive protein 33 116 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi8g0589 Vvi-Chr8 12513557 12513910 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi8g0589 50 106 Calmodulin-binding Proteins AT5G20810 53.448 1.17e-12 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g0589 - K14488 vvi:100250019 199.904