Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi8g0577 | ATGGGACTCTGTCAGGGAAAACCCATTGAAAACCCTCAGACACAGTCCCAAGACCTTATAATTCCCGGTGATGGCGAGCTTTCTACCAACACCCAAACCACCAAAACCCCAAAATTCCCCTTTTACAGCCCAAGTCCACTGCCTAGTGGTTTCAAGAACTCGCCAGCCAATTCAAGCGTGAGTTCCACCCCCTTGCGGATCTTTAAGCGGCCGTTTCCGCCACCTTCTCCGGCAAAGCATATTCGGGCATTGCTTGCTCGAAGGCACGGTTCGGTTAAGCCGAATGAGGCCACAATTCCCGAAGGAAACGAGTGTGAAGTTGGTTTGGACAAGAACTTTGGGTTCTCGAAGCAGTTTGTAGCTCACTACGAGATGGGTGAGGAGGTGGGGCGTGGCCATTTTGGGTACACTTCTTCCGCCAAAGCCAAGAAAGGGAGCTTGAAGGGGCAGGATGTTGCTGTCAAGGTTATCGCCAAATCAAAGATGACTACAGCAATTGCTATTGAAGATGTGAGAAGAGAAGTAAAAATATTACGAGCTCTAACTGGACATAAGAACCTAGTGCAATTCTACGAGGCCTACGAAGATGATGATAATGTTTATATAGTAATGGAGTTATGCAGAGGAGGTGAACTTTTAGATAGAATTCTTGCCAGGGGTGGAAAATACTCTGAAGAAGATGCAAAGGCTGTCATGGTCCAGATTTTGAATGTAACTGCCTTCTGTCATCTCCAAGGTGTGGTTCACCGTGACCTTAAGCCAGAGAATTTTCTTTTCATTTCCAAAGAAGAGAATTCTCCACTGAAGGCTATTGATTTCGGACTTTCTGACTACGTAAAGCCAGATGAGAGGCTGAATGATATTGTAGGAAGTGCATATTATGTAGCTCCTGAAGTTCTTCATAGATCATATGGGACCGAAGCTGACATGTGGAGTGTTGGTGTAATTGCTTATATTCTTCTATGTGGAAGTCGGCCCTTTTGGGCCCGGACAGAATCAGGCATCTTCAAAGCTGTCCTTAAGGCAGATCCAAGCTTTGATGAAGCCCCTTGGCCTTCTTTATCTTCTGATGCAATAGATTTTGTAAAGAGATTGTTGAATAAAGATTACCGCAAGAGGCTAACTGCTGCTCAGGCTCTAAGTCATCCATGGCTGGCCAATTATCATGATGTCAAGATACCATTGGATATGATAGTATATAAACTTGTAAAAGCTTATATATTCTCATCTTCTCTGCGAAAATCGGCTTTGGCGGCTCTTGCTAAGACATTGAGTATAGCTCAGCTAGCTTATTTTCGGGAACAATTTACACTTTTGGGGCCGAACAAAAGTGGATTCGTATCTCTGCAGAACTTTAAGACGGCTGTGACAAAGAACTCCACTGATGCCATAAAGGATTCACGGGTCCTGGAATATGTCAGCATGGTGGGTTCTCTTCAATATAGAAAGTTGGACTTTGAAGAATTTTGCGCAGCAGCCATAAGTGTGCTTCAGCTGGAAGGAATGGAGAGCTGGGAGCAACATGCACGGCGTGGGTATGAGCTATTTGAGAAGGATGGAAATAGGCCCATTATGATAGAGGAACTTGCTTCAGAACTTGGACTTAGCCCATCGGTACCTGTTCATGTAGTTCTCCAAGACTGGATAAGACACTCTGATGGGAAGCTTAGCTTCTTAGGGTTTGTTAGACTCTTACATGGTCCGTCTCGTGCATTCCCCAAAGCGTAA | 1728 | 0.4491 | MGLCQGKPIENPQTQSQDLIIPGDGELSTNTQTTKTPKFPFYSPSPLPSGFKNSPANSSVSSTPLRIFKRPFPPPSPAKHIRALLARRHGSVKPNEATIPEGNECEVGLDKNFGFSKQFVAHYEMGEEVGRGHFGYTSSAKAKKGSLKGQDVAVKVIAKSKMTTAIAIEDVRREVKILRALTGHKNLVQFYEAYEDDDNVYIVMELCRGGELLDRILARGGKYSEEDAKAVMVQILNVTAFCHLQGVVHRDLKPENFLFISKEENSPLKAIDFGLSDYVKPDERLNDIVGSAYYVAPEVLHRSYGTEADMWSVGVIAYILLCGSRPFWARTESGIFKAVLKADPSFDEAPWPSLSSDAIDFVKRLLNKDYRKRLTAAQALSHPWLANYHDVKIPLDMIVYKLVKAYIFSSSLRKSALAALAKTLSIAQLAYFREQFTLLGPNKSGFVSLQNFKTAVTKNSTDAIKDSRVLEYVSMVGSLQYRKLDFEEFCAAAISVLQLEGMESWEQHARRGYELFEKDGNRPIMIEELASELGLSPSVPVHVVLQDWIRHSDGKLSFLGFVRLLHGPSRAFPKA* | 576 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi8g0577 | 575 | FunFam | CDPK-related kinase 1 | 116 | 211 | - | - | |
Vvi8g0577 | 575 | FunFam | CDPK-related kinase 3 | 115 | 287 | - | - | |
Vvi8g0577 | 575 | PANTHER | SERINE/THREONINE-PROTEIN KINASE | 110 | 552 | - | - | |
Vvi8g0577 | 575 | FunFam | Calcium-dependent protein kinase SK5 | 295 | 389 | - | - | |
Vvi8g0577 | 575 | SMART | serkin_6 | 123 | 385 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi8g0577 | 575 | ProSitePatterns | Protein kinases ATP-binding region signature. | 129 | 159 | IPR017441 | GO:0005524 | |
Vvi8g0577 | 575 | MobiDBLite | consensus disorder prediction | 1 | 41 | - | - | |
Vvi8g0577 | 575 | MobiDBLite | consensus disorder prediction | 8 | 40 | - | - | |
Vvi8g0577 | 575 | SUPERFAMILY | EF-hand | 413 | 567 | IPR011992 | - | |
Vvi8g0577 | 575 | Gene3D | - | 404 | 567 | - | - | |
Vvi8g0577 | 575 | CDD | STKc_CAMK | 122 | 384 | - | - | |
Vvi8g0577 | 575 | SUPERFAMILY | Protein kinase-like (PK-like) | 121 | 439 | IPR011009 | - | |
Vvi8g0577 | 575 | Pfam | Protein kinase domain | 123 | 385 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi8g0577 | 575 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 247 | 259 | IPR008271 | GO:0004672|GO:0006468 | |
Vvi8g0577 | 575 | Gene3D | Phosphorylase Kinase; domain 1 | 116 | 212 | - | - | |
Vvi8g0577 | 575 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 427 | 462 | IPR002048 | GO:0005509 | |
Vvi8g0577 | 575 | Gene3D | Transferase(Phosphotransferase) domain 1 | 213 | 398 | - | - | |
Vvi8g0577 | 575 | ProSiteProfiles | Protein kinase domain profile. | 123 | 385 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi8g0577 | 575 | FunFam | CDPK-related kinase 1 | 422 | 494 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vvi8g0577 | Vvi-Chr8 | 12293589 | 12299844 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vvi8g0577 | 1 | 575 | EF-hand Containing Proteins | AT3G50530 | 66.878 | 0.0 | 848 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CAMK_CDPK | Vvi8g0577 | Pkinase | 2.1e-70 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi8g0577 | - | - | vvi:100246588 | 1132.47 |