Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g0552 ATGGTCTCTGATAAGAAGCTTGTTCAAGAGGTAACCGGATGGCTAAAGGTGTTTGATGATGGCTCTGTGGATCGAACATGGACTGGTCCGCCTGAGGCTAGGTTCATGACCGAGCCTGTACCCCCACACCATGAGTTCAAGAACGGAGTTGCCACTTCTGATGTGATCATCGACCCTACTTCCGGCCTTACTGTCCGAATTTATCTACCGGAGAAGAAACCGGGAGATGAGGATAAGCTTCCCGTCCTCCTCCATTTCCATGGAGGTGGCTTTTGCGTAAGCCAAGCTGATTGGTACATCTACTACCACACTCACACCGTGCTTGCAATCAGGGCCAGAGTCATTTGCGTCTCTGTCTACCTCCGGCGAGCTCCGGAAAACCGGCTTCCGGCTGCTTGTGAAGATGGTTACTCTGCTCTCCTTTGGCTTCAATGCGTGGCAAAAGGCCAATCGGAGCAGCCATGGCTGCACTCTCATGCAGATTTCACACGTGTTTTCCTCATTGGAGATAGCTCAGGAGGAAACCTAGTTCACCAGGTGGCTGCAGTCGGGGGGAAGATGCAACTGGGCCCCCTGAGACTGGCCGGAGGAGTTATGATCCACCCGGGCTTCGTCCGGTCCGAGAGGAGCAAGTCGGAACTACAACAAGAGGACTCTCCCTTCCTAACCCTAGAGATGGCGGACAAGTTCTTGAAGTTGGCACTTCCGGTTGGAAGCAACAAAGAACACCCAATTACATGCCCAATGGGGGCGGCAGCGCCACCGATCAGCGATCTGAAACTTCCACCGCTGCTGCTTTGCGTGGCGGAGAAGGACCAGCTCATGGACACAGAGATGGAGTACTACGAGGCCATGAAGAAAGGTGGCAAGGACGTTGAGCTGCTGATTAACATGGGAGTGGGTCACAGCTTCTATCTTGACAAGATCGCCTTGCTCACTGACCCCCACACAGCTGCCCAAGCTGATCATCTCATTGCCGGGATCACAGATTTCATAAAAAACCACTGA 1008 0.5327 MVSDKKLVQEVTGWLKVFDDGSVDRTWTGPPEARFMTEPVPPHHEFKNGVATSDVIIDPTSGLTVRIYLPEKKPGDEDKLPVLLHFHGGGFCVSQADWYIYYHTHTVLAIRARVICVSVYLRRAPENRLPAACEDGYSALLWLQCVAKGQSEQPWLHSHADFTRVFLIGDSSGGNLVHQVAAVGGKMQLGPLRLAGGVMIHPGFVRSERSKSELQQEDSPFLTLEMADKFLKLALPVGSNKEHPITCPMGAAAPPISDLKLPPLLLCVAEKDQLMDTEMEYYEAMKKGGKDVELLINMGVGHSFYLDKIALLTDPHTAAQADHLIAGITDFIKNH* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g0552 335 Gene3D alpha/beta hydrolase 5 334 IPR029058 -
Vvi8g0552 335 Pfam alpha/beta hydrolase fold 83 305 IPR013094 GO:0016787
Vvi8g0552 335 PANTHER ARYLACETAMIDE DEACETYLASE 25 306 - -
Vvi8g0552 335 SUPERFAMILY alpha/beta-Hydrolases 5 335 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi8g0552 Vvi-Chr8 11941530 11942537 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi8g0552 7 325 Carbohydrate Esterase AT1G68620 37.117 1.09e-60 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g0552 - - vvi:100244884 691.419