Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g0549 ATGGCAAGGGAAGAGGTGACACTGCTTGGGATGTGGGCAAGTCCTCTGGCTCTGAGAATTGAATGGGCCTTGAAATGCAAAGGAATTTGGTATAAATGCATAGACGAAGATCTCTTAAACAAGAGCCAACGCCTTCTCACTCACAATCCGATCCACAAGAAAATTCCAGTGCTTTTGCATGGAGGAAAATCCATCCCTGAATCACTCGTCATTCTTGAATACATTGATGAGACATGGAAACAGAATCCCTTGTTGCCAGAAGATCCATACGAAAGAGCCATGGCACGGTTTTGGGCTAAATTTGTGGACGAAAAGTGTTGGACTACAATACCTGGAGTCTTCGGAAACGAGAGGGGGGATGAGCAAGAAAAGTCGAAGGAAAAAGCAATAGAAGAACTCAGAATTCTGGAAAAACAACTTGAAGGGAAAAAGTTTTTTGGGGGAGAGTCAGTTGGGTTTTTGGATATCGTATGTGGTTGGATTGCATACTGGTTACCCTTTATTGAAGACATTACTGGTTTAAAGTTGGTTGATGAAACATCTTTCCCTGCTTTGAGCGCATGGTTCAAGGCCTATCTTAGCGTTCCGTGGGTGAAAGAGCTCTTACCACCTCCAGACAAATTACGTGCTCATCTTATAACTTTTCGCCAGAAACTCCTATCCTCACGGCTCTTGAATATCTGA 684 0.4342 MAREEVTLLGMWASPLALRIEWALKCKGIWYKCIDEDLLNKSQRLLTHNPIHKKIPVLLHGGKSIPESLVILEYIDETWKQNPLLPEDPYERAMARFWAKFVDEKCWTTIPGVFGNERGDEQEKSKEKAIEELRILEKQLEGKKFFGGESVGFLDIVCGWIAYWLPFIEDITGLKLVDETSFPALSAWFKAYLSVPWVKELLPPPDKLRAHLITFRQKLLSSRLLNI* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g0549 227 Pfam Glutathione S-transferase, N-terminal domain 5 77 IPR004045 -
Vvi8g0549 227 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 83 IPR004045 -
Vvi8g0549 227 SFLD Main (cytGST) 2 222 - -
Vvi8g0549 227 SUPERFAMILY Thioredoxin-like 6 106 IPR036249 -
Vvi8g0549 227 FunFam Tau class glutathione S-transferase 85 222 - -
Vvi8g0549 227 Gene3D - 85 222 - -
Vvi8g0549 227 Coils Coil 119 139 - -
Vvi8g0549 227 Pfam Glutathione S-transferase, C-terminal domain 120 194 IPR004046 -
Vvi8g0549 227 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 8 207 IPR045073 -
Vvi8g0549 227 CDD GST_N_Tau 6 79 - -
Vvi8g0549 227 FunFam Tau class glutathione S-transferase 1 87 - -
Vvi8g0549 227 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 220 IPR010987 -
Vvi8g0549 227 CDD GST_C_Tau 89 212 IPR045074 GO:0004364|GO:0006749
Vvi8g0549 227 SFLD Main.3: Omega- and Tau-like 2 222 IPR045073 -
Vvi8g0549 227 Gene3D Glutaredoxin 1 84 - -
Vvi8g0549 227 SUPERFAMILY GST C-terminal domain-like 77 219 IPR036282 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi8g0549 Vvi-Chr8 11923506 11924282 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi8g0549 4 219 Glutathione S-transferase Gene Family AT2G29420 51.389 6.98e-73 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g0549 K00799 - vvi:100262021 473.011