Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g0543 ATGGGTTGTGGCTTCAAAATGGAGGTTTCTCCAAACCCTAATCCCTCAGCGGACTCTGAACCACTGGCAGTGCCGCCTCTGGACCCGGACTTCTTCTCTGATAACAGCAACGACGCTGCCCTGCATGAAACCTTCATGTCTGATCTAGGTTTGGACGGCGTCGACTTCGATTTCACCTTCGACGACCTCTACTTCCCATCTGAATCCGAAGATTTTCTTGCCGATTTTCCTTTGCCCGAGGAAGGTTCTGGTGGTCATGATTCTGCAGATCGGAGCTTTGATGTTTCTAAGGTTTTGAATTCTCCTTCGCCCGAATCGGGGAATTGTGGCGTTGAGAGTTCTCTGCCGTGTCAGGTTTCCGGAGACCGGAATTCCGATGTTTCTTCTATTGAGTTGGGCTGTTGTGATCAGAAGCTTTCTCCGCCGGTGGCATCTCAGAGTTCCAGCGATCAGAATTTGGATGGTGCTAGGGTTTTGAATGTGCCGTCGCCGGAGTCTGGAAGCTGCGATCGGGGGTTTTCGGGACCGGAATCGTCTCAGGGTTCCGGAAACGGTGGATCTGGGGTTCCGGGGGCAGTGAATTCCCCGTTGTTGGATTCTGGTAATTCCGATCATTCTAGTTGGGTTCCATCTTCGCCCAATTTGGCCGATAATTCGTGGGGTGTTGTTGATCAGAAAGTTAAATTGGAAGATTCTGGGAAAAATTCTGTGCCCAAGAGGAAAAAAGAACAGGATGACTCAACAACTGAATCAAGGAGCAGCAAATTTCGGAGATCGTCCATATGCAGCGAAACCGCCAATGCATCGAACGACGAAGAGGAGAAAAAGAAGGCAAGATTGATGAGGAATCGTGAAAGCGCCCAGCTTTCTAGGCAGAGAAAGAAGCATTATGTAGAGGAGCTTGAGGAAAAGATAAGATCAATGCATTCAACAATTCAAGATTTGACTGGTAAGATTTCAATTATAATGGCTGAAAATGCAAATCTTAGGCAACAATTCGGTGGTGGCGGCATGTGCCCACCACCACATGCCGGCATGTACCCTCATCCTTCAATGGCACCCATGGCTTATCCGTGGGTACCTTGTGCACCATATGTAGTGAAGCCGCAAGGGTCTCAAGTACCATTGGTTCCAATACCTAGATTGAAACCACAGGCTCCTGTCTCGGCCCCAAAGGTTAAGAAAACGGAGAATAAGAAGAATGAGGTTCCCTTGGTTCCAAAACCACAGCAGCCTGTGGCGGATCCAAATGTTAAGAAGACGGAGAATAAGAAGAATGAGACTAAAAGTAAGAAGGTTGTCAGTGTTAGTTTGCTTGGCATGCTGTCTTTTATGTTCCTTATGGGATGTCTGGTACCCTTTGTCAACATCAAGTATGGAGGAATTAAGGAAACTGTTCCTGGTAGATCTGATTATATTAGCAATAGGTTTTCTGATATGCACCGCAGGAGGATTTTGACAGTTAAGGACGATTTGAATGGGTCAAATTATGGCATGGGAGTGGGATTTGATGATAGAATTCATAGTGAGAGAGGCCGAGGTGGAGGGTCTGGGTCAGAAGTTAAGCAGAAAGGAGGAGGATCAAAGCCATTACCTGGTTCAGATGGTGAGAAAGCCATGGCATCTCATGCAGCTCTTGCTAAGAAGAGTCCTAAACCTTCTGTTTCTTTGGCTAATGATGTTAGAGAGACTGGTCTAGCAATTGCTGGAAATTTGGCTACAGCATTCCCTGTTTCTGAAGTTGGAAGGAATAAAGGGAGACATCCTCACCTGTTCAGAAACCCGGCTGAACAACATAAGGCTCTTGCATCTGGTTCTTCAGATACTTTAAAAGAAAATTTGCAGCCCACGTCAACCGATGGTAAACTGCAACAGTGGTTCCGTGAAGGCCTTGCAGGGCCAATGTTGAGCTCTGGCATGTGCACCGAAGTTTTCCAGTTTGATGTTTCACCAGCTCCTGGAGCCATAGTACCAGTCTCCTCAGTGGCCAACATCTCTGCAGAAAACCAGCAGAATGCTACTCACCTAAACAAGGGAAGGAATAGAAGGATCCTCCACGGTCTTCCCATACCCCTTGCTGGATCCACCCACAACATTACTGAAGAAGGCATGGGAAGAAATTCACAGAAAGACAACTTTCAAGGCAGTAATAAAAATGTCTCTTCTATGGTTGTTTCTGTTCTTTTTGATCCCAGGGAGGCTGGCGACAGTGATGGTGATGGCATGATGGGTCCCAAATCCCTCTCGAGAATATTTGTTGTTGTGCTTCTAGATAGCGTCAAGTATGTAACTTACTCATGTGGACTTCCGCTGAAGGCGTCTGCTCCTCATCTGGTGACTAAATGA 2346 0.4689 MGCGFKMEVSPNPNPSADSEPLAVPPLDPDFFSDNSNDAALHETFMSDLGLDGVDFDFTFDDLYFPSESEDFLADFPLPEEGSGGHDSADRSFDVSKVLNSPSPESGNCGVESSLPCQVSGDRNSDVSSIELGCCDQKLSPPVASQSSSDQNLDGARVLNVPSPESGSCDRGFSGPESSQGSGNGGSGVPGAVNSPLLDSGNSDHSSWVPSSPNLADNSWGVVDQKVKLEDSGKNSVPKRKKEQDDSTTESRSSKFRRSSICSETANASNDEEEKKKARLMRNRESAQLSRQRKKHYVEELEEKIRSMHSTIQDLTGKISIIMAENANLRQQFGGGGMCPPPHAGMYPHPSMAPMAYPWVPCAPYVVKPQGSQVPLVPIPRLKPQAPVSAPKVKKTENKKNEVPLVPKPQQPVADPNVKKTENKKNETKSKKVVSVSLLGMLSFMFLMGCLVPFVNIKYGGIKETVPGRSDYISNRFSDMHRRRILTVKDDLNGSNYGMGVGFDDRIHSERGRGGGSGSEVKQKGGGSKPLPGSDGEKAMASHAALAKKSPKPSVSLANDVRETGLAIAGNLATAFPVSEVGRNKGRHPHLFRNPAEQHKALASGSSDTLKENLQPTSTDGKLQQWFREGLAGPMLSSGMCTEVFQFDVSPAPGAIVPVSSVANISAENQQNATHLNKGRNRRILHGLPIPLAGSTHNITEEGMGRNSQKDNFQGSNKNVSSMVVSVLFDPREAGDSDGDGMMGPKSLSRIFVVVLLDSVKYVTYSCGLPLKASAPHLVTK* 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g0543 781 PANTHER BASIC-LEUCINE ZIPPER TRANSCRIPTION FACTOR F-RELATED 48 778 - -
Vvi8g0543 781 SMART brlzneu 271 335 IPR004827 GO:0003700|GO:0006355
Vvi8g0543 781 CDD bZIP_HY5-like 276 327 - -
Vvi8g0543 781 Coils Coil 298 332 - -
Vvi8g0543 781 MobiDBLite consensus disorder prediction 74 127 - -
Vvi8g0543 781 Gene3D - 273 334 - -
Vvi8g0543 781 MobiDBLite consensus disorder prediction 196 219 - -
Vvi8g0543 781 MobiDBLite consensus disorder prediction 386 430 - -
Vvi8g0543 781 MobiDBLite consensus disorder prediction 1 31 - -
Vvi8g0543 781 Coils Coil 263 290 - -
Vvi8g0543 781 MobiDBLite consensus disorder prediction 94 127 - -
Vvi8g0543 781 MobiDBLite consensus disorder prediction 139 275 - -
Vvi8g0543 781 MobiDBLite consensus disorder prediction 140 156 - -
Vvi8g0543 781 MobiDBLite consensus disorder prediction 172 189 - -
Vvi8g0543 781 MobiDBLite consensus disorder prediction 502 556 - -
Vvi8g0543 781 MobiDBLite consensus disorder prediction 227 253 - -
Vvi8g0543 781 FunFam bZIP transcription factor 49 274 336 - -
Vvi8g0543 781 Pfam bZIP transcription factor 272 332 IPR004827 GO:0003700|GO:0006355
Vvi8g0543 781 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 273 333 IPR004827 GO:0003700|GO:0006355
Vvi8g0543 781 SUPERFAMILY Leucine zipper domain 275 333 IPR046347 GO:0003700|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi8g0543 15 780 bZIP Transcription Factor Family AT2G40950 45.125 1.81e-162 486
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vvi8g0543 bZIP_1 2.4e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g0543 K25783 - vvi:100248184 1453.34