Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g0538 ATGGAACTCTTCTCTCTGCAGTTTCTCCTCTTCATCTTCCTCCTCTCTCTCTATTTCTATTCTTCAAAAACCAAACCCATCTCCACAGGCTTCAAAGCCTACCCTTTACTCGGAAGCATACCGGAATTCCTCAAAAATCGCCACCGCTTTCTCGACTGGACTACTGATGTCCTCAGCCGCTGCCCAACCAACACCAGCACTATCCGGCGTCCCGGAGGGATTCACGGCGTCATCACGGCAAATCCATTGAACGTCGAGCATATGCTCAAGACCAACTTCGAGAACTACCCGAAGGGCCCGCAATTTATATCCATTCTCGAAGATTTCCTCGGCCGAGGCATCTTCAACTCCGACGCTGATCTCTGGAAGGTTCAGAGGAAGACCGCCAGTTACGAATTCAACACCAAGTCCCTCCGAAATTTCGTTTTTGAGAGCGTGACCGTGGAGACTCAGACGAGGTTGGTCCCGATTTTGAAGAAAGCAGCAGAAACAGGACGTGTGTTAGATGTTCAGGACATTTTGGAGCGGTTCGCTTTTGATAACGTGTGTAAGTTGGCGTTCAACGTCGATCCGGCTTGTCTCGGAGGCGATGCCACAGCCGGCGGAGATTTTATGCGCGCCTTCGAGGACGCTGCAACGCTCAGCTCAGGAAGGTTCATGTATGCGTTTCAATCTATTTGGAAAATGGAGAAGTTCTTCAACATGAGAAAAGAGAAACGACTGAAGAAATCGATAGCCATTGTTCATGAATTTGCGGAGAAGATCATCCAATCCAGACTGGAGCAAAAAGCAGAAAACAAAGACCAAGATTTACTATCGCGGTTCGTCGGAAACTATGACAACTCGCCCGAATTTCTCCGAGATATCGTCATCAGCTTCATCCTCGCCGGCCGGGACACCACATCTTCCGCCCTGACATGGTTCTTTTGGCTACTCTCCTTGAACCCAGAGGTCGAGACAAATATATTAAAAGAGCTCGAAACAGTCCGGGCCCGAAACGGAAAAAGCATCGGCGACACCTATAATTTCGACGAGCTCCGGGAACTGCACTATCTGCACGCAGCCATATCCGAAACGATGCGATTGTACCCACCCGTGCCGGTCGACACAAAATACTGCTTAAACGACGACGTTCTGCCGGACGGCACGTTTGTTGGCAAGGGATGGTTCATGACGTACATACCCTACTCAATGGGGAGGATAGAGAGCATATGGGGCAAAGACTGTCTGCAGTTCAAACCCGAAAGATGGCTGGAAAACGGTGTGTACCGTCAGGAAAACCCGTTTCGGTACCCGATATTTCATGCTGGGCCGAGAATGTGTCTGGGCAAGGACATGGCTTATATTCAGATGAAGTCGATTGCAGCATCGGTGATGGAGCAGTTTGAGGTGAAGGTAGAGGAGAAGGACAAGTGTCCTGAGCATTATTTATCACTGACGCTGAGGATGACAGGCGGGCTAGAAGTGAGAGTGAAGGAGAGATGTGTGGATGTGATAAACTGA 1503 0.4963 MELFSLQFLLFIFLLSLYFYSSKTKPISTGFKAYPLLGSIPEFLKNRHRFLDWTTDVLSRCPTNTSTIRRPGGIHGVITANPLNVEHMLKTNFENYPKGPQFISILEDFLGRGIFNSDADLWKVQRKTASYEFNTKSLRNFVFESVTVETQTRLVPILKKAAETGRVLDVQDILERFAFDNVCKLAFNVDPACLGGDATAGGDFMRAFEDAATLSSGRFMYAFQSIWKMEKFFNMRKEKRLKKSIAIVHEFAEKIIQSRLEQKAENKDQDLLSRFVGNYDNSPEFLRDIVISFILAGRDTTSSALTWFFWLLSLNPEVETNILKELETVRARNGKSIGDTYNFDELRELHYLHAAISETMRLYPPVPVDTKYCLNDDVLPDGTFVGKGWFMTYIPYSMGRIESIWGKDCLQFKPERWLENGVYRQENPFRYPIFHAGPRMCLGKDMAYIQMKSIAASVMEQFEVKVEEKDKCPEHYLSLTLRMTGGLEVRVKERCVDVIN* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g0538 500 PRINTS E-class P450 group I signature 285 302 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g0538 500 PRINTS E-class P450 group I signature 305 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g0538 500 PRINTS E-class P450 group I signature 353 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g0538 500 PRINTS E-class P450 group I signature 441 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g0538 500 PRINTS E-class P450 group I signature 431 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g0538 500 Gene3D Cytochrome P450 11 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g0538 500 Pfam Cytochrome P450 31 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g0538 500 SUPERFAMILY Cytochrome P450 30 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g0538 500 FunFam Cytochrome P450 21 497 - -
Vvi8g0538 500 PRINTS P450 superfamily signature 354 365 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g0538 500 PRINTS P450 superfamily signature 432 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g0538 500 PRINTS P450 superfamily signature 296 313 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g0538 500 PRINTS P450 superfamily signature 441 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g0538 500 PANTHER CYTOCHROME P450 18 488 - -
Vvi8g0538 500 CDD CYP86A 65 487 - -
Vvi8g0538 500 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 434 443 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi8g0538 Vvi-Chr8 11777899 11779401 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi8g0538 1 494 Cytochrome P450 AT3G56630 60.843 0.0 637
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g0538 - - vvi:100267102 992.26