Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g0536 ATGGAGGGAAAAGGATGCCTAGGCAGTTTTTTTCAGAGGTGCAAGCCTTACATAGCAATGATCTCTCTGCAGTTCGGCTATGCCGGCATGAACATCATCACCAAAGTTTCCCTCAACCGTGGAATGAGTCACTATGTGCTAGTTGTCTATAGGCATGCTTTTGCTACTGCAGTTATAGCTCCTTTTGCTCTTGTCCTCGAAAGGAAAGTTAGGCCAAAGATTACCCTTCCAATTTTCCTGCAACTTTTTGTCTTGGGTCTCCTCGGGCCTGTGATTGATCAAAACTTTTACTACGCTGGTCTTAAATTCACATCACCCACTTTCTCCTGTGCCATGAGCAACATGCTCCCAGCTATGACATTTGTCATGGCGGTTCTTTGCAGGATGGAGAAGTTAGACATGAAGAAGTTTAGATGCCAAGCAAAGGTGGTGGGAACCGTGGTGACTGTGGCAGGGGCCATGTTGATGACATTATATAAGGGTCCTATTGTGGAGATGGTGTGGTCCAAGTACGTCCACCCTCACAATAGCAACGCAGCTGAAAACAGTGGAAGCAGTGACAAGGACTGGGTTAAGGGTTCAATTCTCCTGATCATTGCTACTTTTGCCTGGGCATCTTTCTTCATCCTACAGGCAATAACAATGAGGAGATACCAAGCTCACCTCTCACTCACATCGATTGTATGCTTTCTGGGCACACTACAATCCATTGCTGTTACATTTGTGATGGAGCACAGACCCTCTGCTTGGACCATTGGCTGGGATATGAACCTTCTTGCTGCTGCCTACGCTGGTATAGTTTCTTCAAGCATTGCATACTATGTCCAAGGATTGGTCATGCAGAAAAGAGGACCCGTCTTTGTGACTGCTTTTAGCCCTCTTATGATGATCATTGTGGCCATCATGGGCTCTTTCATCCTTGCTGAAAAGATCTTTCTTGGAGGTGTCATCGGCGCAGTACTCATAGTGGCCGGACTTTACTCCGTTCTATGGGGCAAGTACAAGGAATTCAAAGAGAAGGAGGCCGAAACCATCCCAGAAGCTATAAAGGGTGCAGGAGAAAATGGTGGAATGAAGACTGTAATGGAAGAGACTGAAGAAGACAACGACATTGAAATGCAGAAAAGCCAAGCTAATAAGCTGTCTACACCAGCTGTAGCCGTGCAATCTGTGGAGGCACCAAAGGCCTAA 1191 0.4635 MEGKGCLGSFFQRCKPYIAMISLQFGYAGMNIITKVSLNRGMSHYVLVVYRHAFATAVIAPFALVLERKVRPKITLPIFLQLFVLGLLGPVIDQNFYYAGLKFTSPTFSCAMSNMLPAMTFVMAVLCRMEKLDMKKFRCQAKVVGTVVTVAGAMLMTLYKGPIVEMVWSKYVHPHNSNAAENSGSSDKDWVKGSILLIIATFAWASFFILQAITMRRYQAHLSLTSIVCFLGTLQSIAVTFVMEHRPSAWTIGWDMNLLAAAYAGIVSSSIAYYVQGLVMQKRGPVFVTAFSPLMMIIVAIMGSFILAEKIFLGGVIGAVLIVAGLYSVLWGKYKEFKEKEAETIPEAIKGAGENGGMKTVMEETEEDNDIEMQKSQANKLSTPAVAVQSVEAPKA* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g0536 396 Pfam EamA-like transporter family 17 157 IPR000620 GO:0016020
Vvi8g0536 396 Pfam EamA-like transporter family 192 330 IPR000620 GO:0016020
Vvi8g0536 396 SUPERFAMILY Multidrug resistance efflux transporter EmrE 230 334 - -
Vvi8g0536 396 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 160 - -
Vvi8g0536 396 MobiDBLite consensus disorder prediction 349 396 - -
Vvi8g0536 396 PANTHER WAT1-RELATED PROTEIN 15 337 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi8g0536 Vvi-Chr8 11754452 11756483 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi8g0536 1 388 Nodulin-like Gene Family AT5G07050 67.595 0.0 517
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g0536 - - vvi:100241372 771.926