Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g0517 ATGGGAAAGGTCGAAGAAGAGCAGCCTCTTCCCTCTGCTATTGTGGTGTCGGAGCCCTCCGACCAGAATGTCGGCAGCCGGTGTCGGATCCGTGGTCGCGTTGGGTTCAGATGCGTACTGGCGCTGCTTCTGGGCGCTGCCGTTATGCTCTCTGCGATATTCTGGCTTCCGCCCTTCTTGCAGTACGCGGATCAGAGGGATCTGGATCTGGATTCGAGGTTCCGAGGTCATGATATAGTAGCAAGTTTCAAAGTTAAGAAGTCAATTTCTTTGCTGGAAGACTATCTATTGCAGCTTGAGAATGACATCTTTGTTGAGATAGAAGGTATCGAGTCCAAGGTGGTTGTTTTATCTCTAGAACCCTCAGCTGGAACAAACATAACGAAGGTTGTGTTTGCGGTTGATCTGGATGCAAAATCTTCAAGAATATTAACTTCTCAAAGTTTGATCAGGGAATTGTTTGAATCTTTGGTTACGCAACAATCATCTCTACGTTTGACTGCATCTTTGTTTGGGGACCCATTCACGTTTGAGGTGCTAAAATTTCCTGGAGGAATAACAGTAAGCCCTCCACAGAGTGCCTTCCTTCTGCAGAAAGTGCAGATCCTTTTCAATTTTACCTTAAACTTCTCTATCGAACAAATACTAGAAAATTTCAATGAGCTGACCAGCCAGCTGAAGTCGGGTTTACATCTAGCATCTTATGAGAACTTGTACATCAGCTTGACGAATTCAAAGGGTTCAACAGTGTCTCCTCCAACTACGGTTCAGTCATCTGTTCTACTAGCAGTTGGGAATACCCCCTCGCTTCCAAGGTTAAAACAGTTGGCTCAAACCATCACAGGTTCTCATTCTAGAAACCTTGGCTTGAATAACACGGTATTTGGTAGGGTTAAGCAAGTTCGACTTTCATCTATTCTACAACATTCCCTCCATGGTGGTGCCCCTTCTTCATCACCTACTCCTGCTCCAGTGCCACATCCTCACAACCATCATCACCACCATCACCATCATCACCACCATCATCACAATGCCCATATTGCTCCCACAATTGCAGCAGCACCTGTGCCTGCATCTTGGAAAAGTTCTCCTGCACCTGAGAAAAGTTCACCTGCACCTGAGAAAAGTTCACCTGCACCTAAGAAAAGTTCACCTGCACCCAAAAGTTCTCCTGCACCTGAAAGAAGTTCTCCTGCACCTGAAGGAAGTTCTCCTGCACCTGAGAGAAGTTATGAAGCAAGGCCTCCTGGTTGCCAAAATGGGCATAAAAGAAAGTTCACGAGCAAGACCAAAAAGCCAGCTCAATCAGTCCCTACTGTTGCACCAAGGATTTCTCCGCACTATTCTGCGGCCTCACCTCATCCACAGGTGGGCCCACCTGGGACTGTCACCCATGCAGTTCCTGCACTAAGTCCTTTGCCAAGCATAGTTCTAGCTCATGCTCAGCCCCCATCAAAAAGTGAATTTGATGCAAAGCCTCCAGACATAATGCCATCATTTCCACCGTCACCATCCTCATATGCTGCAGGTCTTGTTCCTACTGTTCAATGGGTATTTCCACTATTTCTAGCTTTTGTATTACATTTGTAA 1590 0.4635 MGKVEEEQPLPSAIVVSEPSDQNVGSRCRIRGRVGFRCVLALLLGAAVMLSAIFWLPPFLQYADQRDLDLDSRFRGHDIVASFKVKKSISLLEDYLLQLENDIFVEIEGIESKVVVLSLEPSAGTNITKVVFAVDLDAKSSRILTSQSLIRELFESLVTQQSSLRLTASLFGDPFTFEVLKFPGGITVSPPQSAFLLQKVQILFNFTLNFSIEQILENFNELTSQLKSGLHLASYENLYISLTNSKGSTVSPPTTVQSSVLLAVGNTPSLPRLKQLAQTITGSHSRNLGLNNTVFGRVKQVRLSSILQHSLHGGAPSSSPTPAPVPHPHNHHHHHHHHHHHHHNAHIAPTIAAAPVPASWKSSPAPEKSSPAPEKSSPAPKKSSPAPKSSPAPERSSPAPEGSSPAPERSYEARPPGCQNGHKRKFTSKTKKPAQSVPTVAPRISPHYSAASPHPQVGPPGTVTHAVPALSPLPSIVLAHAQPPSKSEFDAKPPDIMPSFPPSPSSYAAGLVPTVQWVFPLFLAFVLHL* 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g0517 529 MobiDBLite consensus disorder prediction 327 346 - -
Vvi8g0517 529 MobiDBLite consensus disorder prediction 310 468 - -
Vvi8g0517 529 MobiDBLite consensus disorder prediction 378 400 - -
Vvi8g0517 529 PANTHER F20B24.21 1 522 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi8g0517 Vvi-Chr8 11586566 11591690 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi8g0517 1 523 C3H Transcription Factor Family AT3G10810 47.070 6.70e-106 324
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g0517 - - vvi:100248215 825.083