Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g0495 ATGGATAGAGCAGTGATGGCTAAAATTCGATTGATTGTATCTGATTTTTTGTTAGCATTCATGTGGGTATCGTCTGGAGCTTTGAATAAGCTCTTCGTGAATAGGGTCTTGGGATGGGGCCATGAGCCAAGAGGTGAAATCATGAAGGCAACGCTTTCAATCATCAACATGTTCTTCTTCGCCTTCTTGGGGAAGATTAGCAAGGGTGGGGCATACAATCCTCTCACTGTGTTGGCTGGGGCTATTTCTGGGGATTTCAGTCGTTTTCTCTTCACTGTTGGTGCAAGGATTCCTGCTCAGGTAATTGGATCTATCACTGGGGTTAGGCTCCTCATTAACACCTTTCCTGAAGTGGGATTTGGGCCACGTTTGACTGTTGACATCCATCATGGTGCACTGACAGAAGGGTTTCTGACATTTGCAATTGTTATGATCTCACTTGGGCTCTCGAGAAACATCCCTGGGAGCTTCTTCATGAAAACTTGGATCTCAAGTGTGTCCAAGCTAGCTCTTCATATACTTGGCTCTGATCTAACTGGTGGATGCATGAACCCAGCTGCTGTAATGGGATGGGCTTATGCTCGCGGGGATCATATAACCAAGGAGCATATACTTGTTTACTGGCTTGCCCCAATGGAGGCAACTCTACTGGCAGTCTGGACATTCCGGTTGCTGGTTCAGCCACACAAGGAGGAGAAAGAAAAAATGAAGGCTAAATCAGAGTAA 726 0.4601 MDRAVMAKIRLIVSDFLLAFMWVSSGALNKLFVNRVLGWGHEPRGEIMKATLSIINMFFFAFLGKISKGGAYNPLTVLAGAISGDFSRFLFTVGARIPAQVIGSITGVRLLINTFPEVGFGPRLTVDIHHGALTEGFLTFAIVMISLGLSRNIPGSFFMKTWISSVSKLALHILGSDLTGGCMNPAAVMGWAYARGDHITKEHILVYWLAPMEATLLAVWTFRLLVQPHKEEKEKMKAKSE* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g0495 241 Gene3D Glycerol uptake facilitator protein. 7 240 IPR023271 -
Vvi8g0495 241 SUPERFAMILY Aquaporin-like 9 237 IPR023271 -
Vvi8g0495 241 PRINTS Major intrinsic protein family signature 165 187 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vvi8g0495 241 PRINTS Major intrinsic protein family signature 92 111 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vvi8g0495 241 PRINTS Major intrinsic protein family signature 10 29 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vvi8g0495 241 PRINTS Major intrinsic protein family signature 134 152 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vvi8g0495 241 PRINTS Major intrinsic protein family signature 205 225 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vvi8g0495 241 PANTHER AQUAPORIN SIP2-1-RELATED 5 241 IPR044226 GO:0015267
Vvi8g0495 241 Pfam Major intrinsic protein 9 221 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi8g0495 Vvi-Chr8 11323960 11328562 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi8g0495 6 241 Major Intrinsic Protein MIP AT3G56950 63.291 1.60e-109 314
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g0495 K09875 - vvi:100246584 460.299