Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi8g0471 | ATGTTCAGTGGTCTTTGTTACAATAACAGGGGCCAGGAAGAATTGCTGAAATCTCACTTCCAAAATCAACTCCATAGTCTCCATAACAGACGATTCTCTATGAAGCTACACTCTTTTGCAGCATTACTTTTTTCCATACTATTGTTTCTCCATCAAACTATTGCTGATCTGGAGTCAGACAAACAAGCGCTCCTTGAGTTTGCCTTTGTTGTCCCTCATGTTCGCACAATCAACTGGAGTCCGGCTACTGCAATCTGCATCTCTTGGGTTGGCATCAAATGCGATGGTAACCGTGTAGTTGCCCTCCGGCTACCTGGTGTTGGCCTCTATGGTCCCATTCCAGCCAACACACTTGGGAAGCTGGATGCTCTTAAGACCCTCAGCCTCCGTTCCAACCACCTCAATGGGAATCTTCCATCTGATGTTCTGTCCCTCCCTTCTCTGCAGTACATGTACCTCCAACATAACAATTTTTCAGGTAATATTCCTTCCTCTCTTCCACCCCTGCTCATCTTGCTTGATCTCTCCTTCAATTCCATTGTGGGCAACATTCCAGCCACAATTCAGAACTTAACGCATCTCACTGGATTAAACCTCCAAAACAATTCCCTAACTGGGCCCATCCCTGTTATCAACCTCCCAAGGCTTAACCATGTGAATTTGAGCTATAACGACCTTAACGGTTCAATTCCATATTTCTTCCGCAAGTTCCCTGCTTCCTCTTTTGAAGGGAACTCTCTGTTATGTGGACAGCCACTAAACCATTGCTCTTCAGTCACTCCCTCGCCTTCTCCTTCCCCATCTTCCATACCATCCCCAGCAACAGTTTCTCCAGAGCCAAGAGCTAGCAACAAGAAGAAACTAAGTATAGGGGCTATTATTGCCATTGCAATTGGGGGTTCTGCAGTGTTGTGTCTCCTATTTGTGGTGATACTGCTATGCTGTCTGAAGAAAAAAGATGGTGAAGGTACTGTCTTACAGAAAGGAAAGTCCCTGAGCAGTGGAAAGAGTGAAAAGCCTAAGGAGGACTTTGGGAGTGGGGTGCAAGAGCCCGAGAAGAACAAGTTAGCTTTCTTCGAAGGCTCCTCCTATAATTTTGATCTTGAGGATTTGTTAAGGGCCTCTGCAGAAGTACTGGGAAAGGGAAGCTATGGGACGGCCTACAAGGCCATCTTGGAGGAGGGAACAATTGTGGTTGTGAAGAGGTTGAAAGAAGTGGCAGCGGGCAAAAGAGAGTTTGAACAACACATGGAGATTGTGGGGAGGGTCAGTTGCCACCCAAATGTCGTGCCTCTTCGTGCTTACTACTACTCAAAGGATGAGAAGCTCCTGGTTTATGACTACATAACGGGCGGCAGCTTGTTTGCACTATTGCATGGGAACAGGGATCCTGAGAAAACACTGCTGAACTGGGAATCCAGAGTAAAGATTGCCCTTGGAACTGCAAAGGGTATTGTTCATATCCACTCTGCCAATGGTGGGAAATTCACCCATGGCAATATCAAGTCCTCCAATGTCCTCCTCACCCAAGACGTTGATGGCCAAATCTCAGATTTTGGCCTGACATCTCTGATGAACTACCCTTTGGTCACATCTAGAAGCCTTGGTTACCGAGCTCCTGAGGTGATTGAAACTCGGAAATCTACTCAAAAGTCCGATGTTTACAGTTACGGTGTGCTCCTCCTTGAGATGCTTACAGGCAAGGCACCAGTACAGTCACCTGGGCGTGATGATGTGGTTGATCTCCCAAGATGGGTCCAGTCTGTTGTTCGAGAGGAATGGACGGCTGAGGTGTTTGATGTAGAGCTGATGAAGGATCAAAGTTATGAAGAAGAGATGGTGCAAATGCTTCAGATCGCAATGGCCTGTGTGGCAAAGATGCCAGACATGAGGCCTAAGATGGAGGAAGTTGTTAGGCTGATGGAAGAAATCCGGCCATCAGACTCAGAAAACCGGCCATCCTCCGACAACCAATCCAAGGGCTCCACCGCACAAACCCCATGA | 2004 | 0.4721 | MFSGLCYNNRGQEELLKSHFQNQLHSLHNRRFSMKLHSFAALLFSILLFLHQTIADLESDKQALLEFAFVVPHVRTINWSPATAICISWVGIKCDGNRVVALRLPGVGLYGPIPANTLGKLDALKTLSLRSNHLNGNLPSDVLSLPSLQYMYLQHNNFSGNIPSSLPPLLILLDLSFNSIVGNIPATIQNLTHLTGLNLQNNSLTGPIPVINLPRLNHVNLSYNDLNGSIPYFFRKFPASSFEGNSLLCGQPLNHCSSVTPSPSPSPSSIPSPATVSPEPRASNKKKLSIGAIIAIAIGGSAVLCLLFVVILLCCLKKKDGEGTVLQKGKSLSSGKSEKPKEDFGSGVQEPEKNKLAFFEGSSYNFDLEDLLRASAEVLGKGSYGTAYKAILEEGTIVVVKRLKEVAAGKREFEQHMEIVGRVSCHPNVVPLRAYYYSKDEKLLVYDYITGGSLFALLHGNRDPEKTLLNWESRVKIALGTAKGIVHIHSANGGKFTHGNIKSSNVLLTQDVDGQISDFGLTSLMNYPLVTSRSLGYRAPEVIETRKSTQKSDVYSYGVLLLEMLTGKAPVQSPGRDDVVDLPRWVQSVVREEWTAEVFDVELMKDQSYEEEMVQMLQIAMACVAKMPDMRPKMEEVVRLMEEIRPSDSENRPSSDNQSKGSTAQTP* | 668 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi8g0471 | 667 | Gene3D | Ribonuclease Inhibitor | 170 | 258 | IPR032675 | - | |
Vvi8g0471 | 667 | CDD | STKc_IRAK | 379 | 644 | - | - | |
Vvi8g0471 | 667 | Gene3D | Transferase(Phosphotransferase) domain 1 | 449 | 665 | - | - | |
Vvi8g0471 | 667 | MobiDBLite | consensus disorder prediction | 259 | 282 | - | - | |
Vvi8g0471 | 667 | Pfam | Leucine rich repeat N-terminal domain | 58 | 95 | IPR013210 | - | |
Vvi8g0471 | 667 | PANTHER | OS05G0588300 PROTEIN | 42 | 656 | - | - | |
Vvi8g0471 | 667 | MobiDBLite | consensus disorder prediction | 334 | 348 | - | - | |
Vvi8g0471 | 667 | Gene3D | Ribonuclease Inhibitor | 59 | 169 | IPR032675 | - | |
Vvi8g0471 | 667 | FunFam | Leucine-rich repeat receptor-like protein kinase | 168 | 256 | - | - | |
Vvi8g0471 | 667 | FunFam | pollen receptor-like kinase 1 | 341 | 448 | - | - | |
Vvi8g0471 | 667 | SUPERFAMILY | L domain-like | 70 | 253 | - | - | |
Vvi8g0471 | 667 | MobiDBLite | consensus disorder prediction | 651 | 667 | - | - | |
Vvi8g0471 | 667 | Pfam | Protein kinase domain | 376 | 638 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi8g0471 | 667 | MobiDBLite | consensus disorder prediction | 326 | 348 | - | - | |
Vvi8g0471 | 667 | Gene3D | Phosphorylase Kinase; domain 1 | 341 | 448 | - | - | |
Vvi8g0471 | 667 | ProSiteProfiles | Protein kinase domain profile. | 373 | 644 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi8g0471 | 667 | SUPERFAMILY | Protein kinase-like (PK-like) | 377 | 641 | IPR011009 | - | |
Vvi8g0471 | 667 | ProSitePatterns | Protein kinases ATP-binding region signature. | 379 | 410 | IPR017441 | GO:0005524 | |
Vvi8g0471 | 667 | MobiDBLite | consensus disorder prediction | 641 | 667 | - | - | |
Vvi8g0471 | 667 | FunFam | protein STRUBBELIG-RECEPTOR FAMILY 8 | 449 | 655 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vvi8g0471 | Vvi-Chr8 | 10966875 | 10969044 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vvi8g0471 | 15 | 660 | Receptor kinase-like Gene Family | AT5G58300 | 63.287 | 0.0 | 789 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-III | Vvi8g0471 | Pkinase | 2.1e-40 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi8g0471 | - | - | vvi:100255050 | 1249.96 |