Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g0462 ATGGGTGCTATAGATTCATATCTTCTAGCTCCTCTGCAGCTGGGTTTGGACAGTTTGACAGGGAGGAGGAACTTGAAGAGGACTGATTTTGTGGTTGGGAATAGATTGGGCGAAGGGTCCTTTGGTGTTGTTTATTCTGGTGTTTTGGTTCCAAAGAATGTGAGTGTGGAAGAAAGGCCACAGAAGAGAGGAACAGGTCAAGCGTTGCAGTTGGATGGCAGGTTCAAGGAGAAGGTTATTCTCAAGAAGGTGAAGGTTGGAGTCCAAGGGGCTGAAGAATGTGGTGATTTTGAGGAGTGGTTTAATTACAGGCTGTCTAGAGCAGCTCCTGAAACATGTGCTGAGTTCCTTGGAAGTTTCATTGCTGATCAAACAAATTCACAATTTACAAAGGGTGGAAAATGGCTTGTCTGGAAATTCGAGGGAGATAGAGACCTTGCAGACTACATGAAAGATCGTAACTTCCCTTTAAACTTGGAGTCTACTATGTTTGGGCGTGTCTTGCAAGGACTAGGTTCAATTGAACGAAATGCATTAATCATAAAGCAAATAATGCGCCAGATTATTACTTCACTCAAGAAAATCCATGACACGGGTATTGTTCACCGAGACGTAAAGCCCTCAAACTTAGTGGTGACAAAGAGAGGACAGATTAAGCTCATCGATTTTGGAGCAGCCACAGACCTCCGAATTGGCAAAAACTATGTACCCAACCGTGGGTTGCTTGATCCTGACTATTGCCCACCTGAACTATATGTGCTCCCAGAGGAAACACCAACCCCCCCTCCAGAGCCGATTGCTGCCTTTCTTTCTCCAATTTTATGGCAGCTCAATAGTCCTGATCTATTTGATATGTATTCTGCTGGCATTGTACTGATGCAAATGGCAGTACCAAGTTTGAGGTCTACAGCGGGCTTAAAGAATTTCAATTTAGAATTAAAAACAGTGGGGTATGACTTGAAAAGATGGAGGGAGTACACTCGGTTCAGGCCTGACTTGACTATTCTTGATCTAGACTCAGGCAGAGGGTGGGATCTTGCCACTAAACTTATTTCAGAGAGGGGTTCCCTCAGAAGGGGCCGTTTATCAGCTGCTGCAGCTCTTAGACATCCTTATTTCTTGCTGGGTGGTGACCAGGCTGCTGCTGTTCTTTCAAAACTAAGCCTGAGCAAGTAG 1176 0.4481 MGAIDSYLLAPLQLGLDSLTGRRNLKRTDFVVGNRLGEGSFGVVYSGVLVPKNVSVEERPQKRGTGQALQLDGRFKEKVILKKVKVGVQGAEECGDFEEWFNYRLSRAAPETCAEFLGSFIADQTNSQFTKGGKWLVWKFEGDRDLADYMKDRNFPLNLESTMFGRVLQGLGSIERNALIIKQIMRQIITSLKKIHDTGIVHRDVKPSNLVVTKRGQIKLIDFGAATDLRIGKNYVPNRGLLDPDYCPPELYVLPEETPTPPPEPIAAFLSPILWQLNSPDLFDMYSAGIVLMQMAVPSLRSTAGLKNFNLELKTVGYDLKRWREYTRFRPDLTILDLDSGRGWDLATKLISERGSLRRGRLSAAAALRHPYFLLGGDQAAAVLSKLSLSK* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g0462 391 SUPERFAMILY Protein kinase-like (PK-like) 27 374 IPR011009 -
Vvi8g0462 391 Gene3D Phosphorylase Kinase; domain 1 15 140 - -
Vvi8g0462 391 SMART serkin_6 30 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi8g0462 391 Pfam Protein kinase domain 180 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi8g0462 391 ProSiteProfiles Protein kinase domain profile. 30 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi8g0462 391 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC-RELATED 2 390 - -
Vvi8g0462 391 ProSitePatterns Serine/Threonine protein kinases active-site signature. 200 212 IPR008271 GO:0004672|GO:0006468
Vvi8g0462 391 Gene3D Transferase(Phosphotransferase) domain 1 170 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi8g0462 Vvi-Chr8 10903553 10906032 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi8g0462 113 227 MAP Kinase Kinase Gene Family AT4G29810 30.172 1.72e-09 57.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-4 Vvi8g0462 Pkinase 2.8e-20 CL0016