Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g0456 ATGGAGCTGCATAACAACTCCACGAGCTTTGAAATTTCGGGCGCATCTTCTCGAGTCCAGGAAAAGTGGAACAAACCCCAAAGGAGCCGCCATAAAAGTGTGCAGTTTGAAGAGGATCTGATACATGAGGAGGATCCGAGGTTGATTTATATAAATGATTGGAGGAGGACGAATGATAAGTATGAGTTCACAGGGAATGGGATCCGGACTAGCAAGTACACATTGATCACTTTCTTGCCCAAGAACATCTTCATACAGTTCCATCGTGTTGCTTATTTGTATTTTCTGGGTATTGCTGCTCTTAACCAGCTTCCGCCTCTGGCTGTCTTTGGGAGAACAGTATCTCTTTTTCCTCTCCTCTTTGTGCTTTGTGTTACAGCTGTTAAAGATGGCTATGAAGATTGGCGGAGGCACAGGTCAGATGAAGTGGAGAACAACCGTGAGGCTCTGGTGCTTTATGCTGGTCAATTTCAGAAGAAAAAATGGAAAAAGATACAAGCTGGTGAGGTGGTGAAGATCTATGCAGATGAGACAATTCCTTGTGACATGGTTTTGCTAGGGACGAGTGATCCCAGCGGAATTGCCTACATTCAGACAATGAATTTGGATGGTGAGTCAAACCTGAAGACAAGGTATGCTAGGCAGGAAACTGCTTCGATGGTGCTTGATGTGGGAGCCATATCAGGGCTCATCAAATGTGAACAACCTAATAGGAATATTTATGAGTTCAAGGCGAATATGGAGTTCAATGGGCAAAGATTTCCCCTCAACCAATCAAACATCATTCTGCGTGGTTGTCAGTTGAAGAACACAGAATGGGTAATTGGCGTAGTGGTGTATGCGGGACAGGAAACAAAAGCAATGTTGAACAGTGCAGCCTCTCCTTCCAAAAGAAGCAAACTGGAAATTTACATGAACAGAGAGACCCTGTGGTTGTCTTTTTTTCTTTTTATCATGTGTCTTGCCGTGGCCGTTGGAATGGGTTTATGGCTTGAACGACACAAAAACCAGCTTGACACTCTGCCTTATTACAGGAAAAGATACTTCACCACTGGGAGGTTTAATGGGAAATCATATAAATATTATGGGATTTATATGGAAACCTTTTTCTCTTTTTTGAGTTCTATTATAGTGTTTCAGATAATGATACCAATATCTCTGTATATTACAATGGAGTTGGTTCGGTTGGGGCAGTCGTACTTTATGATTGAAGACAAGCATATGTATGACAGTAGCTCCGACACGAGGTTTCAGTGCAGATCTTTGAATATTAATGAGGATTTGGGTCAAGTACGATATGTATTTTCAGACAAGACAGGGACACTTACTGAAAACAAAATGGAATTCCGAAGAGCTAGTGTATATGGGAAGAATTATGGAAGCTTCTTGATTAGGGCTGATCCATTGGAGGAAAATGGTTCAGTACATGCAACAACTGTAGAGGGAAGGGGACAGAAGCTTAAATCTCAAATTGCCATTGATAATGAACTCATGGAATTGTTGCATAAAGACCTAGCTGGAGATGAAAGGATTGCAGCACATGAGTTTTTCCTCACACTGGCTGCATGTAATACTGTGATCCCTATTCCTACTTCATCTGCTAGTTGCACAGAGAGTGGATTACATGAATATGTAGGAGCTATCAATTATCAGGGTGAATCTCCTGATGAGCAAGCGCTAGTTGCTGCAGCTTCTGCTTATGGATATACTCTTTTTGAGCGCACATCTGGCCATATTGTGATTGATGTCAATGGCGAGAAACTAAGGCTGGATCTGTTGGGTCTGCATGAGTTTGATAGCGTGCGCAAAAGAATGTCTGTTGTCATCAGATTCCCCAATGATACTGTGAAAGTCTTGGTGAAAGGTGCTGATTCTTCAATGTTTAGCATTTTAGCAGAAGACAGTGGGAGGAATGGTCATGTAAGGCCTGCAACTCAGAGCCATTTGACCGAATATTCATCACAAGGCTTACGCACACTTGTAGTTGCTGCTAGGGATCTCACTGATGAGGAACTTTCAGAGTGGCAGTGCAAGTATGAAGATGCAAGCACTTCATTGACTGATAGATCTGTAAAACTTCGTCAAACAGCAGCTTTCATTGAATGCAAGTTAAATCTTCTTGGGGCTACTGGGATTGAAGACAAGCTACAGGATGGTGTACCAGAAGCCATTGAGTCTCTTCGGCAGGCTGGAATCAAGGTCTGGGTTCTAACTGGAGATAAGCAGGAGACAGCGATTTCAATTGGTCTCTCTAGCAAACTCCTGACTACAGATATGAATCAGATTATTATAAATGGGAATTCAGAGGATGAGTGTAGAAGTCTTTTGGCTGATGCTAAGGCCAAATATTTTGTGAAATCATTAGATTGCGGAAGTAAGTATTTGAAATATAAAAAGGATGCTGAAGTCACTCTGGACAACACAAAGTCTTCTACCATGCCACAACAGCATTCAGGGAAGGAAGAAGAGATGCTGAGCACATCACATGCACTCATAATTGATGGGAATAGCCTGGTGTACATTTTAGAGAAAGATCTGGAGTCAGAGCTTTTCGACCTTGCAACTTCCTGTAAGGTTGTCCTTTGCTGTCGTGTTGCACCCTTGCAAAAAGCTGGAATTGTTGATCTAATTAAGAGTCGTACTGATGATATGACACTTGCTATAGGAGATGGTGCCAACGATGTTTCAATGATTCAAATGGCAGATGTTGGTGTGGGAATATGTGGTCAGGAGGGGCGTCAAGCAGTAATGGCATCGGATTTTGCAATGGGACAGTTTCGGTTTCTGAAAAGATTGCTTCTGGTGCATGGACACTGGAATTATCAGCGTGTTGGTTATTTGGTTCTTTACAACTTCTACCGCAATGCTGTTTTTGTTTTGATGCTATTCTGGTATATACTGTCCACAGCTTTTTCAACAACTTCGGCATTAACAGATTTGAGCAGTGTATTCTATTCACTTATCTATACCTCCATCCCTACCATTGTTGTTGGCATTCTGGATAAGGACCTTAATGATGAGACACTACTCCAGTATCCAAGACTTTATGGCGCGGGACATAGACAGGAAAGTTACAATATGCGCCTCTTCTGGATCACAATGATTGACACGCTATGGCAGAGTCTTGTTATCTTTTATATACCTGTTTTCATCTATAGCGATAGTTCAATTGATATATGGAGTATGGGTAGTTTGTGGACAATCACTGTTGTTATTCTTGTGAATGTACACTTGGCAATGGACGTTCAACGATGGATATTCATTACTCATGTTGCAGTATGGGGATCAATTATCATTACATATGCTTGTCTGATTGCAGTGGATTCTATACCTATCTTCCCCAATTACGGGACAATTTATCATCTGGCAAAGTCACCTTCCTATTGGCTGTCTATTTTTCTTATACTAACCATAGCATTGCTTCCTCGCTTTCTTTTTAAAGTTATACGTCAGAATTTTTGGCCTTCGGATATCCAGATAGCTAGAGAAGCTGAGATACTGGGAGACCAGCCTGATAATTTGCCTTCAAAATCAAGTAAAGGTTCTGGTTGA 3552 0.4161 MELHNNSTSFEISGASSRVQEKWNKPQRSRHKSVQFEEDLIHEEDPRLIYINDWRRTNDKYEFTGNGIRTSKYTLITFLPKNIFIQFHRVAYLYFLGIAALNQLPPLAVFGRTVSLFPLLFVLCVTAVKDGYEDWRRHRSDEVENNREALVLYAGQFQKKKWKKIQAGEVVKIYADETIPCDMVLLGTSDPSGIAYIQTMNLDGESNLKTRYARQETASMVLDVGAISGLIKCEQPNRNIYEFKANMEFNGQRFPLNQSNIILRGCQLKNTEWVIGVVVYAGQETKAMLNSAASPSKRSKLEIYMNRETLWLSFFLFIMCLAVAVGMGLWLERHKNQLDTLPYYRKRYFTTGRFNGKSYKYYGIYMETFFSFLSSIIVFQIMIPISLYITMELVRLGQSYFMIEDKHMYDSSSDTRFQCRSLNINEDLGQVRYVFSDKTGTLTENKMEFRRASVYGKNYGSFLIRADPLEENGSVHATTVEGRGQKLKSQIAIDNELMELLHKDLAGDERIAAHEFFLTLAACNTVIPIPTSSASCTESGLHEYVGAINYQGESPDEQALVAAASAYGYTLFERTSGHIVIDVNGEKLRLDLLGLHEFDSVRKRMSVVIRFPNDTVKVLVKGADSSMFSILAEDSGRNGHVRPATQSHLTEYSSQGLRTLVVAARDLTDEELSEWQCKYEDASTSLTDRSVKLRQTAAFIECKLNLLGATGIEDKLQDGVPEAIESLRQAGIKVWVLTGDKQETAISIGLSSKLLTTDMNQIIINGNSEDECRSLLADAKAKYFVKSLDCGSKYLKYKKDAEVTLDNTKSSTMPQQHSGKEEEMLSTSHALIIDGNSLVYILEKDLESELFDLATSCKVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLVHGHWNYQRVGYLVLYNFYRNAVFVLMLFWYILSTAFSTTSALTDLSSVFYSLIYTSIPTIVVGILDKDLNDETLLQYPRLYGAGHRQESYNMRLFWITMIDTLWQSLVIFYIPVFIYSDSSIDIWSMGSLWTITVVILVNVHLAMDVQRWIFITHVAVWGSIIITYACLIAVDSIPIFPNYGTIYHLAKSPSYWLSIFLILTIALLPRFLFKVIRQNFWPSDIQIAREAEILGDQPDNLPSKSSKGSG* 1184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g0456 1183 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 31 1165 - -
Vvi8g0456 1183 Pfam Phospholipid-translocating ATPase N-terminal 49 114 IPR032631 -
Vvi8g0456 1183 CDD P-type_ATPase_APLT_Dnf-like 65 1048 - -
Vvi8g0456 1183 SFLD C1.7: P-type atpase like 419 939 - -
Vvi8g0456 1183 ProSitePatterns E1-E2 ATPases phosphorylation site. 437 443 IPR018303 -
Vvi8g0456 1183 FunFam Phospholipid-transporting ATPase 703 928 - -
Vvi8g0456 1183 SUPERFAMILY HAD-like 430 934 IPR036412 -
Vvi8g0456 1183 Gene3D - 545 684 IPR023299 GO:0000166
Vvi8g0456 1183 NCBIfam phospholipid-translocating P-type ATPase 63 1163 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Vvi8g0456 1183 Gene3D - 125 290 - -
Vvi8g0456 1183 Pfam Phospholipid-translocating P-type ATPase C-terminal 916 1156 IPR032630 -
Vvi8g0456 1183 Pfam E1-E2 ATPase 147 393 - -
Vvi8g0456 1183 FunFam Phospholipid-transporting ATPase 550 694 - -
Vvi8g0456 1183 Gene3D - 704 928 IPR023214 -
Vvi8g0456 1183 SUPERFAMILY Calcium ATPase, transmembrane domain M 64 1155 IPR023298 -
Vvi8g0456 1183 NCBIfam HAD-IC family P-type ATPase 366 457 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vvi8g0456 1183 NCBIfam HAD-IC family P-type ATPase 858 976 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vvi8g0456 1183 SFLD p-type atpase 419 939 IPR044492 -
Vvi8g0456 1183 SUPERFAMILY Calcium ATPase, transduction domain A 146 287 IPR008250 -
Vvi8g0456 1183 Pfam haloacid dehalogenase-like hydrolase 432 747 - -
Vvi8g0456 1183 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 441 720 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi8g0456 Vvi-Chr8 10852165 10863494 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi8g0456 12 1175 Primary Pumps ATPases AT5G04930 56.562 0.0 1339
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g0456 K14802 - vvi:100244740 2348.16