Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi8g0455 | ATGAGAGAAAGTAAGTTACGTGGCTTCATACTATTGAGCATTGGGAGTGGGTGTGATCATGCGCGTGAGATAAAAGCTCTTCCTCTTGATCTTCACTTGGTGAGTATGGAGAGGCACACAGACGCCACCATGAGCACAATGGAGTGCACCTGGTCGGAAAAGATCTCCGGCGATCGGAAAAGAGCCATCGACGAGCTGCTTCGAGGTCGCTCCTTCACCAAGCAGCTTCGCAGCGTCCTCCTCGGAGGGGATCAACAGGAGTCGGCCCAGGATCTTCTAGTGAAAATCTCGAGGTCATTCACCGATACTCTTTCTATATTGAATTCCGGCGAGTCCGACGAGGCCGTCTCACAGATTCCGGCGAGTGGTCAGCTGTATTCGCCGGGTTGGCATGGCCGGAGGTCGGAGGAATCTTGCGAGAGTGGTAAGAGTTCCACCAAGGATCGCAGGGGCTGTTACAAGCGAAGGAAGAATTCGCAATCTTGGATCAGAATCACCCCTAATTTTCACGATGACGGTTATGCCTGGCGAAAATACGGACAAAAAGTCATACTCAATGCTAAACATCAAAGAAGCTACTATAGGTGCACCCACAAGCATGACCAGGGCTGCATGGCAACCAAACAGGTTCAGATGACTGAAGAGGAGCCCCCAATGTACAAAACCACATACCACGGCCAGCACACATGCAAAAGCATGCTGAAGTCATCTCAGATTATGGTGGAAAATTCTACTGCAAGAGATTCTTCCATTCTGCTCAGCTTTGAATCAAACAATCAAGATGATAGCAACGCCTTTTTCTCATCATTCCCCTTGATAAAACAAGAGGAAGAGATCCCAAATGATGATCAGGAGGTGACCTACAATAACCATACCAATAACAACAACAAGAACAACAACTCCTCATCCTCTGATTATCTTCTGTCACTGGAGCTCACCACATTTGAATCCAATCTGGGGTCTGATCATGGTGATGTCCTTTCTGGGGTTAACTCTTCTTGTACGGACAGCACTCACAGTTTGGATGATATGATGATGGACTTTGATGATGTTCTTATCGGTTTTGAGTGTTAG | 1074 | 0.4749 | MRESKLRGFILLSIGSGCDHAREIKALPLDLHLVSMERHTDATMSTMECTWSEKISGDRKRAIDELLRGRSFTKQLRSVLLGGDQQESAQDLLVKISRSFTDTLSILNSGESDEAVSQIPASGQLYSPGWHGRRSEESCESGKSSTKDRRGCYKRRKNSQSWIRITPNFHDDGYAWRKYGQKVILNAKHQRSYYRCTHKHDQGCMATKQVQMTEEEPPMYKTTYHGQHTCKSMLKSSQIMVENSTARDSSILLSFESNNQDDSNAFFSSFPLIKQEEEIPNDDQEVTYNNHTNNNNKNNNSSSSDYLLSLELTTFESNLGSDHGDVLSGVNSSCTDSTHSLDDMMMDFDDVLIGFEC* | 358 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi8g0455 | 357 | ProSiteProfiles | WRKY domain profile. | 165 | 233 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Vvi8g0455 | 357 | SUPERFAMILY | WRKY DNA-binding domain | 163 | 231 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Vvi8g0455 | 357 | Gene3D | WRKY domain | 152 | 232 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Vvi8g0455 | 357 | Pfam | WRKY DNA -binding domain | 171 | 231 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Vvi8g0455 | 357 | SMART | WRKY_cls | 170 | 232 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Vvi8g0455 | 357 | ProSiteProfiles | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 18 | - | - | |
Vvi8g0455 | 357 | MobiDBLite | consensus disorder prediction | 133 | 148 | - | - | |
Vvi8g0455 | 357 | MobiDBLite | consensus disorder prediction | 122 | 151 | - | - | |
Vvi8g0455 | 357 | PANTHER | WRKY TRANSCRIPTION FACTOR 21-RELATED | 65 | 291 | IPR044810 | GO:0003700 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vvi8g0455 | Vvi-Chr8 | 10843901 | 10846082 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vvi8g0455 | 61 | 232 | WRKY Transcription Factor Family | AT3G56400 | 41.143 | 3.25e-35 | 129 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Vvi8g0455 | WRKY | 1.1e-24 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi8g0455 | - | - | vvi:100255013 | 615.15 |