Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi8g0444 | ATGGGCTGTTTCAAGGTTTTGAAGAGTAAGAAGAAAAAGGCTGAGCGCACTGCTTACATTAAAAGGATCAATCCTCAGGAGCTAACACCCACTACACTGCCTGAACCTAAACTTCAGAGCCGCACACTTCAATCTGCACCCCCAAGTTTTAGAACCCTAGTTAAACCTGTTCAACCAGTTAAAAGAATCATTAACAGTAGAACACGAGCATTGTCCGCCCCATCAAGCCTCAATACAACTGAACAAGATGCGCTTGCATCAAATGAATGTGAAGAACAAGAAGAGTTGAAGAGTCGTGTTGGATTAACAAAGGAACAGCGATCGCCAAACCCTCAGCCTCTTCCTCTCCCATCACCTCAAGGCACTGTTGTACTGAAAGCTACAGGAAGTTTTAAAGCAGGGAATGCGAGTGGCCCTCTCTATGCTTCTGGCCCACTGCCATTGCCTCCTTTAGGAGCACTCCGGAACTTTGGCTATGAAGAATTATCAAACGCCTGCCTCAATTTCTCTTCAGATCGATGTGTGTCGGAAGGACTTTCATCCATAATTTACAAGGCTTCCTTTGGGGATGATGCTTCAGGTTCAAAAAAGCTGGAAGCCACTGTTACCCGGCTTCACCCATCCACCCAGGGTTTAAAGGAATTCATAAACGAGGTAAACACGCTTGCATCATTGCAACATCCCCACCTCTGTAAGTTGCTTGGTTTCCATGCGCGTGAGGGATCTGACCAGAGGATGTTGGTTTATGAGAGGCTCTACCATGGAAGCTTAGACCGTCTTCTATATGGGAGATCGGATGGGCCATCCATTGATTGGAACACAAGAATGAAAGTTGCTTTATGTGCTGCACAGGGTCTCACTTTCTTGCATGAAGAAGGGCCTTTCCAGGCTATGTACAATGAATTTTCAACTGCCAATATACAGATTGACAAGGATTTTAGTGCAAAGCTTTCGGGATATGGTTGCGTTGGCCACATTCCAGAAGCAGATGTTTGCAGTAGTTCAGTTGCAGTAGCAAATCTATCAGTGGAGACATTAGAGAGAGGATTACTAACTCCCAAAAGCAATGTTTGGAGTTTTGGAATAGTTCTTCTTGAGCTACTCACTGGGCACAAGAACCTTGACAGCCGCCATCCGAAGGAAGAGAGGAACTTAGTTAAGTGGAGCCGACCTTATCTGGCCGATGATTGTCGACTCTCATTGATAATGGATCCTCACCTAAAAGGCCGCTTCCCTGCCAAAGCAGCCCGAACAGTGGCAGATATTGCCCAAAGATGTCTTCAGATGGACCCCTTAGAAAGACCCACCATGAGAACCATTGTGGAGCATCTCAAAATCATTCAAGACATGAAGTATTCCTGCCGGTTTCCTCTGCAAGAGCCGGCAGCAGTTGCTGGAAAACAGATGTCAAGATCGCCTAGTCTCAATGGGATCATTACCCCAGCGCCCAGGCTAAGTTTCTCCCCTTCTCCGCCATCAAGAACCCACCTCTCCGTTTCTCCAACAAGACCGCCTGTAGTACCCGTGTCTCTTCCTCCCCGAGCCTGTTCCTCCACTCTCTCTTTGGAGGACCTTGAACGGCAGGAAAGCAGGAAATCTTCATCATCAACATCCACCTTTCGGAGGCCCAGTGTTGAAGGTTTTTGA | 1647 | 0.4706 | MGCFKVLKSKKKKAERTAYIKRINPQELTPTTLPEPKLQSRTLQSAPPSFRTLVKPVQPVKRIINSRTRALSAPSSLNTTEQDALASNECEEQEELKSRVGLTKEQRSPNPQPLPLPSPQGTVVLKATGSFKAGNASGPLYASGPLPLPPLGALRNFGYEELSNACLNFSSDRCVSEGLSSIIYKASFGDDASGSKKLEATVTRLHPSTQGLKEFINEVNTLASLQHPHLCKLLGFHAREGSDQRMLVYERLYHGSLDRLLYGRSDGPSIDWNTRMKVALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCVGHIPEADVCSSSVAVANLSVETLERGLLTPKSNVWSFGIVLLELLTGHKNLDSRHPKEERNLVKWSRPYLADDCRLSLIMDPHLKGRFPAKAARTVADIAQRCLQMDPLERPTMRTIVEHLKIIQDMKYSCRFPLQEPAAVAGKQMSRSPSLNGIITPAPRLSFSPSPPSRTHLSVSPTRPPVVPVSLPPRACSSTLSLEDLERQESRKSSSSTSTFRRPSVEGF* | 549 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi8g0444 | 548 | MobiDBLite | consensus disorder prediction | 25 | 44 | - | - | |
Vvi8g0444 | 548 | MobiDBLite | consensus disorder prediction | 532 | 548 | - | - | |
Vvi8g0444 | 548 | ProSiteProfiles | Protein kinase domain profile. | 169 | 446 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi8g0444 | 548 | Gene3D | Phosphorylase Kinase; domain 1 | 151 | 250 | - | - | |
Vvi8g0444 | 548 | MobiDBLite | consensus disorder prediction | 70 | 86 | - | - | |
Vvi8g0444 | 548 | MobiDBLite | consensus disorder prediction | 70 | 89 | - | - | |
Vvi8g0444 | 548 | MobiDBLite | consensus disorder prediction | 95 | 122 | - | - | |
Vvi8g0444 | 548 | MobiDBLite | consensus disorder prediction | 469 | 500 | - | - | |
Vvi8g0444 | 548 | SUPERFAMILY | Protein kinase-like (PK-like) | 150 | 455 | IPR011009 | - | |
Vvi8g0444 | 548 | Pfam | Protein tyrosine and serine/threonine kinase | 175 | 444 | IPR001245 | GO:0004672|GO:0006468 | |
Vvi8g0444 | 548 | PANTHER | OS01G0588500 PROTEIN-RELATED | 103 | 448 | - | - | |
Vvi8g0444 | 548 | MobiDBLite | consensus disorder prediction | 467 | 548 | - | - | |
Vvi8g0444 | 548 | Gene3D | Transferase(Phosphotransferase) domain 1 | 252 | 455 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vvi8g0444 | Vvi-Chr8 | 10745935 | 10749087 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vvi8g0444 | 153 | 447 | Glycoside Hydrolase | AT3G07070 | 38.562 | 4.03e-54 | 187 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-II | Vvi8g0444 | PK_Tyr_Ser-Thr | 3.1e-25 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi8g0444 | - | - | vvi:100246618 | 1008.05 |