Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g0433 ATGAGTTGCAGCGAGAGTAATACAGGAGGAGAACAAGGGGAAATTGAGGAATCGATTATAAGAAATTCCGTTGAGGTCGACCCAAAATCTTTCACCCAGAATGGGTCGATTATGGCCCCCCAGTTAACAATTGATGAGAATCTTCTTGTTGATCCAAAATTAATTTTTATCGGATCGAAAGTTGGTGAAGGAGCACATGGGAAAGTTTATGAAGGAAGGTATGGTGATCAAATTGTTGCTATCAAAGTTCTCCACCGTGGAAGCACTTCAGAAGAAAGAGCTGCACTTGAGGGACGTTTTGCCCGGGAAGTTAATATGATGTCAAGAGTAAAACATGAGAATCTTGTCAAGTTTATTGGAGCTTGTAAGGATCCTTTAATGGTGATAGTTACAGAGCTATTACCAGGTATGTCACTTCGGAAGTATTTAACCAGTATTCGTCCAAAACGGATGGACATTCATGTTGCATTAAGTTTTGCTCTTGACATTGCTCGAGCCATGGAGTGTTTGCATGCCAATGGGATTATACATAGAGATCTTAAACCTGACAATTTGTTGCTTACGGCCAATCAGAAATCTGTAAAGCTTGCAGATTTTGGTCTTGCAAGGGAAGAATCTGTGACTGAGATGATGACCGCAGAAACTGGGACATACCGTTGGATGGCTCCCGAGCTGTACAGCACTGTGACATTGCGTCAGGGTGAGAAGAAGCATTATAATAACAAGGTTGATGTCTACAGCTTTGGGATTGTCTTCTGGGAATTATTGACCAATCGCATGCCATTTGAAGGCATGTCAAATTTGCAGGCCGCTTATGCTGCTGCATTTAAGCAAGAGCGCCCTAGTCTTCCAGAAGACATATCCCCTGATCTTGCATTTATCATACAATCTTGTTGGGTTGAGGACCCTAACATGCGACCCAGCTTCAGCCAGATCATCCGCATGCTGAACACATTTCATTTCAAAGTCACACCACCTCCATCATCATTACTAGAAGAATCTGACACCAATGGAGCAGCAATGTCTAGCAATGGTACCATGACCGAGTTGTCCGCACGTACGAGAGGGAAGTTTTCTTTCCTTCGCCAACTTTTTGCTGCAAAGAGGACAAGGAATTCACAGTGA 1125 0.4311 MSCSESNTGGEQGEIEESIIRNSVEVDPKSFTQNGSIMAPQLTIDENLLVDPKLIFIGSKVGEGAHGKVYEGRYGDQIVAIKVLHRGSTSEERAALEGRFAREVNMMSRVKHENLVKFIGACKDPLMVIVTELLPGMSLRKYLTSIRPKRMDIHVALSFALDIARAMECLHANGIIHRDLKPDNLLLTANQKSVKLADFGLAREESVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVFWELLTNRMPFEGMSNLQAAYAAAFKQERPSLPEDISPDLAFIIQSCWVEDPNMRPSFSQIIRMLNTFHFKVTPPPSSLLEESDTNGAAMSSNGTMTELSARTRGKFSFLRQLFAAKRTRNSQ* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g0433 374 ProSitePatterns Serine/Threonine protein kinases active-site signature. 175 187 IPR008271 GO:0004672|GO:0006468
Vvi8g0433 374 FunFam serine/threonine-protein kinase HT1 136 337 - -
Vvi8g0433 374 CDD STKc_MAP3K-like 61 316 - -
Vvi8g0433 374 Pfam Protein tyrosine and serine/threonine kinase 57 316 IPR001245 GO:0004672|GO:0006468
Vvi8g0433 374 PRINTS Tyrosine kinase catalytic domain signature 243 265 IPR001245 GO:0004672|GO:0006468
Vvi8g0433 374 PRINTS Tyrosine kinase catalytic domain signature 287 309 IPR001245 GO:0004672|GO:0006468
Vvi8g0433 374 PRINTS Tyrosine kinase catalytic domain signature 169 187 IPR001245 GO:0004672|GO:0006468
Vvi8g0433 374 PRINTS Tyrosine kinase catalytic domain signature 131 144 IPR001245 GO:0004672|GO:0006468
Vvi8g0433 374 ProSitePatterns Protein kinases ATP-binding region signature. 61 82 IPR017441 GO:0005524
Vvi8g0433 374 ProSiteProfiles Protein kinase domain profile. 55 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi8g0433 374 FunFam Kinase suppressor of Ras 1 44 134 - -
Vvi8g0433 374 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 55 327 - -
Vvi8g0433 374 Gene3D Transferase(Phosphotransferase) domain 1 137 350 - -
Vvi8g0433 374 SUPERFAMILY Protein kinase-like (PK-like) 53 329 IPR011009 -
Vvi8g0433 374 SMART serkin_6 55 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi8g0433 374 Gene3D Phosphorylase Kinase; domain 1 44 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi8g0433 Vvi-Chr8 10650944 10660941 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi8g0433 38 373 MAP Kinase Kinase Kinase AT5G01850 74.238 0.0 532
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Vvi8g0433 PK_Tyr_Ser-Thr 4.3e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g0433 - - vvi:100244846 736.487