Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g0413 ATGGCTTCACGCAGCCTCTTGTGTCTCTATGCCTTTGTGCTGTTTAGTCTTGCCACCGCAGATTTCTCTGCAGCCTTGTCTCCTTATTTTTATAACAAAGTGTGTCCCAAAGCTTTGCCAACCATCAAACGAGTGGTTGAGGCCGCAGTGCAGAAGGAGAAGCGCATGGGTGCTTCTTTGCTTCGTCTCCACTTCCATGACTGTTTTGTTAATGGTTGTGATGCTTCAATTCTCCTAGACGCTACATCCACGATTGACAGTGAAAAGAATGCGGGCGCTAATGCAAATTCTGCAAGAGGATTCAATGTCGTCGACGACATCAAGTCTCAGGTTGACAAAGTCTGCGGACGCCCAGTGGTGTCCTGTGCAGACATCTTGGCTGTTGCAGCACGGGACTCTGTGGTTGCGCTTGGAGGACCATCATGGACTGTACAACTGGGAAGGAGAGACTCGACAACAGCGAGCAGGACAGACGCCAACAACAACATTCCCTCGCCATTCATGGACCTCCCCGCACTCATCACCAGGTTCAGCAACCAAGGCCTGGACACTAAAGACCTAGTTGCACTCTCAGGTGGCCACGTCATAGGATTTGCCCAGTGTAATTTCTTCAAGAACCGCATCTACAATGAGTCCAACATCGATCCCGCCTTCGCTCGTGCCCGCCAATCCACATGCCCTCCCAACGGCGGTGACACCAAACTGGCTCCCCTGGACCCGACCGCAGCGCGCTTCGACACCGGATACTTCACCAACTTGGTGAAGAGGAGGGGACTGCTCCACTCGGATCAGGCACTCTTCAATGGTGGCTCAACCGATACACTGGTGAAGACATACAGTACAAACTTTGGAGCATTTTCAGCTGATTTCGCCAAGTCCATGGTGAAGATGGGAAACATAAAGCCATTGACAGGGAAGAAGGGCCAGATTCGTGTGAACTGCAGGAAGGTGAACTAG 957 0.5172 MASRSLLCLYAFVLFSLATADFSAALSPYFYNKVCPKALPTIKRVVEAAVQKEKRMGASLLRLHFHDCFVNGCDASILLDATSTIDSEKNAGANANSARGFNVVDDIKSQVDKVCGRPVVSCADILAVAARDSVVALGGPSWTVQLGRRDSTTASRTDANNNIPSPFMDLPALITRFSNQGLDTKDLVALSGGHVIGFAQCNFFKNRIYNESNIDPAFARARQSTCPPNGGDTKLAPLDPTAARFDTGYFTNLVKRRGLLHSDQALFNGGSTDTLVKTYSTNFGAFSADFAKSMVKMGNIKPLTGKKGQIRVNCRKVN* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g0413 318 SUPERFAMILY Heme-dependent peroxidases 26 318 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vvi8g0413 318 Gene3D - 30 315 - -
Vvi8g0413 318 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi8g0413 318 PRINTS Plant peroxidase signature 292 305 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi8g0413 318 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi8g0413 318 PRINTS Plant peroxidase signature 236 251 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi8g0413 318 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi8g0413 318 PRINTS Plant peroxidase signature 252 269 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi8g0413 318 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi8g0413 318 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi8g0413 318 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi8g0413 318 ProSiteProfiles Plant heme peroxidase family profile. 25 318 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi8g0413 318 PANTHER PEROXIDASE 72-RELATED 23 317 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi8g0413 318 CDD secretory_peroxidase 26 317 IPR033905 GO:0004601|GO:0042744
Vvi8g0413 318 FunFam Peroxidase 164 297 - -
Vvi8g0413 318 ProSitePatterns Peroxidases active site signature. 57 68 IPR019794 GO:0004601
Vvi8g0413 318 Gene3D Peroxidase, domain 2 164 297 - -
Vvi8g0413 318 PRINTS Haem peroxidase superfamily signature 238 253 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi8g0413 318 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi8g0413 318 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi8g0413 318 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi8g0413 318 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi8g0413 318 Pfam Peroxidase 43 281 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi8g0413 318 FunFam Peroxidase 29 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi8g0413 Vvi-Chr8 10343107 10344275 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi8g0413 1 318 Peroxidase AT5G05340 57.231 7.28e-126 361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g0413 K00430 - vvi:100258515 637.491