Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g0412 ATGGCTTCCCATCATTTTTCTTCCTCATCATTTTTCACCACCTTCAGGCTCTGCTTTTGCCTCTTATTCCCATTTTTGCTTGGCATGGCATCGGCTCAATTAACCACAAATTATTACTCATCATCATGTCCAAATGCCCTTTCAATCATCAAATCTGCAGTGAACACGGCAGTGAACAATGAGGCTCGCATGGGCGCATCCCTGCTCCGTCTTCATTTCCATGATTGCTTTGTTAATGGGTGTGATGCATCGATCCTGCTGGACGACACATCCAACTTCACGGGTGAGAAGACGGCAGGCCCAAATGCAAATTCGGTAAGAGGATATGAGGTGGTGGACACCATTAAATCTCAATTGGAGGCTTCCTGCCCTGGGGTGGTTTCTTGTGCTGACATCTTAGCCGTTGCTGCTCGGGACTCCGTTGTGGCGCTGAGGGGACCTAGCTGGATGGTTAGATTAGGCAGAAGAGACTCGACGACAGCGAGCTTAAGTGCAGCTAATAGTAACATTCCTGCCCCCACTTTGAACCTTAGTGGCCTCATCTCTGCCTTCACAAACAAAGGTTTCAATGCCAGGGAAATGGTGGCTCTGTCAGGGTCTCATACAATAGGGCAAGCAAGGTGCACAACCTTCCGGACTAGGATCTATAATGAAGCCAACATAGATGCCTCATTCAAGACGTCTCTGCAAGCCAACTGTCCAAGCTCTGGGGGTGACAACACCCTCTCTCCACTTGACACCCAAACTCCTACAACTTTTGATAATGCCTACTACACCAATTTGGTGAACAAGAAGGGCCTTCTCCACTCGGACCAACAGCTCTTCAATGGGGGTTCCACGGACGCTGTGGTTAACACATACAGCACCAGGTCGACTACTTTCTTCACAGACTTTGCAAATGCCATGGTGAAGATGGGAAACCTCAGCCCACTTACTGGAACCAGTGGCCAAATCAGGACCAACTGCAGGAAAACCAACTGA 981 0.4893 MASHHFSSSSFFTTFRLCFCLLFPFLLGMASAQLTTNYYSSSCPNALSIIKSAVNTAVNNEARMGASLLRLHFHDCFVNGCDASILLDDTSNFTGEKTAGPNANSVRGYEVVDTIKSQLEASCPGVVSCADILAVAARDSVVALRGPSWMVRLGRRDSTTASLSAANSNIPAPTLNLSGLISAFTNKGFNAREMVALSGSHTIGQARCTTFRTRIYNEANIDASFKTSLQANCPSSGGDNTLSPLDTQTPTTFDNAYYTNLVNKKGLLHSDQQLFNGGSTDAVVNTYSTRSTTFFTDFANAMVKMGNLSPLTGTSGQIRTNCRKTN* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g0412 326 CDD secretory_peroxidase 33 325 IPR033905 GO:0004601|GO:0042744
Vvi8g0412 326 SUPERFAMILY Heme-dependent peroxidases 33 326 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vvi8g0412 326 Pfam Peroxidase 51 288 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi8g0412 326 ProSitePatterns Peroxidases active site signature. 65 76 IPR019794 GO:0004601
Vvi8g0412 326 ProSitePatterns Peroxidases proximal heme-ligand signature. 193 203 IPR019793 -
Vvi8g0412 326 Gene3D - 37 323 - -
Vvi8g0412 326 PANTHER PEROXIDASE 72-RELATED 29 324 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi8g0412 326 FunFam Peroxidase 37 179 - -
Vvi8g0412 326 PRINTS Haem peroxidase superfamily signature 193 208 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi8g0412 326 PRINTS Haem peroxidase superfamily signature 127 144 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi8g0412 326 PRINTS Haem peroxidase superfamily signature 65 79 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi8g0412 326 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi8g0412 326 PRINTS Haem peroxidase superfamily signature 145 157 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi8g0412 326 PRINTS Plant peroxidase signature 126 136 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi8g0412 326 PRINTS Plant peroxidase signature 43 62 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi8g0412 326 PRINTS Plant peroxidase signature 300 313 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi8g0412 326 PRINTS Plant peroxidase signature 145 160 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi8g0412 326 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi8g0412 326 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi8g0412 326 PRINTS Plant peroxidase signature 192 204 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi8g0412 326 PRINTS Plant peroxidase signature 67 87 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi8g0412 326 PRINTS Plant peroxidase signature 107 120 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi8g0412 326 Gene3D Peroxidase, domain 2 171 305 - -
Vvi8g0412 326 FunFam Peroxidase 171 305 - -
Vvi8g0412 326 ProSiteProfiles Plant heme peroxidase family profile. 33 326 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi8g0412 Vvi-Chr8 10330280 10338973 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi8g0412 29 326 Peroxidase AT5G05340 65.000 1.08e-145 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g0412 K00430 - vvi:100253452 586.645