LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vvi8g0379	ATGGCAGAGGCTCAACTCGTTGCTGGAGTGGAGCTGTTGACAACGCCCAACAATGGAAGCTACGCTTACAGATTTGGCATGAAGCCCAAGAATGTTACAGCGATTTGCATTCCCCAGCCACACACAAACGCTGGAGGCCTATATCTTTATCGTAACCCTTTACGCGCTACCACCCCCCTCTATTTGTTTCAGCTTGCATTTGCTTCTCTCCTCACTAGTGGATGCAACTTCATTCTCAAGCCTTTCAGTCAAGTCACCATTGTTGGGCAGATCATGGGTGGAATTATTGGAGGCCCCTCATTTATAGGGCGCATTGATGCTTTTGCAGATATGGTGTTTCCAATTAGTATAATACACCTGTTGGAGACACTGTCATCTTTCGGAATCATGTTCTACCTGTTCCTTCTGGGAGTGAAGATGGACTATGGCATGATCAGAAGTTCAGGGAGTAAAGCATGGCTAATAGGTTTCTCGACCTATCTTTTCCCAATATTACTCACAGTACCCGTCTCCTTGATCCTGAAGAGATACATTAAGATGGACCATGAACTTGAAACATCCGTACAATGTCTCTCACTTCTAGTGTCTTCTACCACGTTCCATAGCGTTGCTTGCTTCTTAGAGGATCTCAAACTCCTCAATTCCGAGCTTGGCCGCTTGGCAATGTCCTCCTCCATGATCAGTGGCGGCTTGAGCTATACCACACTGATTTTTGCTTTTACTGCACGGCAGTCCCAATTAAATGGCGATGGTTTTGGAGTATGGTTATGTATTATTATGAGTGGAATCGCTCAGATTATCTTCACCAGAGTGGCCATCAAGCCCATACTGATTTGGATGATCAAGCAGACCCCAGAAGGTCAACCCGTCAAAGAATTTCACCACTGCATCATCTTCCTGCTAGTACTGGGAAGTTCATTGATTAGCGAGATCACGGGAATGCACGGTTTCTTCGGGCCTATGGTGTTGGGGTTGGAAGTACCGGAAGGATCCCCGTTAGCATTTACCTTGGTGGACAGACTGGATTTCTTCTTTTCTTTCGTGATGTTGCCTATCTACTTCATTGTGTGTGGTGGGAGAACAAACTTGACCCGAGTGACTCCTCACACTTGTCTTGTAGTTGAGCTCATGTCCCTGCTTGGTTTCTTGTCTAAGTTTATTGGAACCATCCTGCCTTGTGTCTTCCTCTGCGACATGTTTCTCAGAGACGCAATCACCCTCAGCCTCATACTTAACAGTATAGGAATTCTTGACATTCACTTTTACACCAGCGCGAATCAACTCAAGTTTATTGATAACCAATGCTTCAGTGTTCTGAATACAACAGCGATGTTCATTACAGGAATTGTGTCGCATCTCGTTAGTACCCTCTACGACCCTTCAACAAGATATATGGCAGACAAAAGACGTACCATACAGCACTCCTCACGCAAACTTAAGCTCCGGTTATTGGTCTGCGTACACCAGGAAGAGCAAGTCCCTAACATCATTAACCTGCTTGAAATGTCAAACCCCACTAGAGAGAGTCCAATTGCTGTTTATCTTCTCCATCTCATTGAGCTTGTGGGCCGTGCAACCCCGTTGCTTGTTGCTCACCAACCCTTCAAGCACTTTGATCATCGTCCCACCCCAATTATCAATGCCTTCAGAATGTATGAAAGAAACAACCTTTCCATCGTCACATTGCAGCCCTTCACTTCTATTGCGCCCTATGCAACCATGCATAACGACATTTGCACACTGGCTCTTGATAAGAGGGCTTCCCTTATCATCCTCCCTTTCCACAGGCAATGGAACACTGATCACACCAAGGATATATCCAAGTTTCGGAGTGTTAATCTCAGGGTCCTAGACAAAGCCCCTTGCTCTGTTGGGATCATTATCGATCGTGGGGCTTGGCGCGTCACCAAGTCTGTGCTAGGAAGCTGGTCTCTTTTCCGGGTTGGCGTGTTCTTCATAGGCGGAGCCGATGATCGTGAGGCAGTGGCATATGCAATGCGCATGTCTGAACATCCCAATGTTACTGTAACACTAGTGAGGTTCTTACCCTTACAGATGACCATTAATGATCATGATCCAAATGAGAGGAGAATGGATAATGACATGATCAACGAGTTTAAAGTATCAAAGGTAGGAAGTGAAAAGGCTCTGTACAAGGAGGAGATGGTGGTGGACAGTGTGTGTACATGCAGTGGAATTCGATCAATGGAGAACTCTTTTGATCTAATACTAGTTGGCAGACGCCATGAAGAGAATTCCCCCATGGTGTATGGACTAAATGACTGGATGGACTACCCGGAATTGGGATTTCTGGGGGACATACTAGCATCAGAGGATTTCACTGGGAAGGTATCAACATTGGTGATTCAACAGCATAGTTGGGCAGCCGGAGAAGAAAGCTCAAGACATTCAGAGGATAGTCCTAGCCGCCAAGACTCGTTTCTACCTCAGGTGTCCCCCAACGGTCTTAAAGGCTATTGA	2481	0.4603	MAEAQLVAGVELLTTPNNGSYAYRFGMKPKNVTAICIPQPHTNAGGLYLYRNPLRATTPLYLFQLAFASLLTSGCNFILKPFSQVTIVGQIMGGIIGGPSFIGRIDAFADMVFPISIIHLLETLSSFGIMFYLFLLGVKMDYGMIRSSGSKAWLIGFSTYLFPILLTVPVSLILKRYIKMDHELETSVQCLSLLVSSTTFHSVACFLEDLKLLNSELGRLAMSSSMISGGLSYTTLIFAFTARQSQLNGDGFGVWLCIIMSGIAQIIFTRVAIKPILIWMIKQTPEGQPVKEFHHCIIFLLVLGSSLISEITGMHGFFGPMVLGLEVPEGSPLAFTLVDRLDFFFSFVMLPIYFIVCGGRTNLTRVTPHTCLVVELMSLLGFLSKFIGTILPCVFLCDMFLRDAITLSLILNSIGILDIHFYTSANQLKFIDNQCFSVLNTTAMFITGIVSHLVSTLYDPSTRYMADKRRTIQHSSRKLKLRLLVCVHQEEQVPNIINLLEMSNPTRESPIAVYLLHLIELVGRATPLLVAHQPFKHFDHRPTPIINAFRMYERNNLSIVTLQPFTSIAPYATMHNDICTLALDKRASLIILPFHRQWNTDHTKDISKFRSVNLRVLDKAPCSVGIIIDRGAWRVTKSVLGSWSLFRVGVFFIGGADDREAVAYAMRMSEHPNVTVTLVRFLPLQMTINDHDPNERRMDNDMINEFKVSKVGSEKALYKEEMVVDSVCTCSGIRSMENSFDLILVGRRHEENSPMVYGLNDWMDYPELGFLGDILASEDFTGKVSTLVIQQHSWAAGEESSRHSEDSPSRQDSFLPQVSPNGLKGY*	827

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vvi8g0379	826	Pfam	Sodium/hydrogen exchanger family	68	449	IPR006153	GO:0006812\|GO:0015297\|GO:0016020\|GO:0055085\|GO:1902600
	Vvi8g0379	826	Gene3D	-	59	466	IPR038770	-
	Vvi8g0379	826	MobiDBLite	consensus disorder prediction	796	826	-	-
	Vvi8g0379	826	PANTHER	CATION/H + ANTIPORTER	35	793	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Vvi8g0379	Vvi-Chr8	9772720	9775397	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vvi8g0379	31	807	Antiporter Super Family	AT2G13620	37.454	5.98e-175	523

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vvi8g0379	-		-	vvi:100853937	1642.86

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