Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g0379 ATGGCAGAGGCTCAACTCGTTGCTGGAGTGGAGCTGTTGACAACGCCCAACAATGGAAGCTACGCTTACAGATTTGGCATGAAGCCCAAGAATGTTACAGCGATTTGCATTCCCCAGCCACACACAAACGCTGGAGGCCTATATCTTTATCGTAACCCTTTACGCGCTACCACCCCCCTCTATTTGTTTCAGCTTGCATTTGCTTCTCTCCTCACTAGTGGATGCAACTTCATTCTCAAGCCTTTCAGTCAAGTCACCATTGTTGGGCAGATCATGGGTGGAATTATTGGAGGCCCCTCATTTATAGGGCGCATTGATGCTTTTGCAGATATGGTGTTTCCAATTAGTATAATACACCTGTTGGAGACACTGTCATCTTTCGGAATCATGTTCTACCTGTTCCTTCTGGGAGTGAAGATGGACTATGGCATGATCAGAAGTTCAGGGAGTAAAGCATGGCTAATAGGTTTCTCGACCTATCTTTTCCCAATATTACTCACAGTACCCGTCTCCTTGATCCTGAAGAGATACATTAAGATGGACCATGAACTTGAAACATCCGTACAATGTCTCTCACTTCTAGTGTCTTCTACCACGTTCCATAGCGTTGCTTGCTTCTTAGAGGATCTCAAACTCCTCAATTCCGAGCTTGGCCGCTTGGCAATGTCCTCCTCCATGATCAGTGGCGGCTTGAGCTATACCACACTGATTTTTGCTTTTACTGCACGGCAGTCCCAATTAAATGGCGATGGTTTTGGAGTATGGTTATGTATTATTATGAGTGGAATCGCTCAGATTATCTTCACCAGAGTGGCCATCAAGCCCATACTGATTTGGATGATCAAGCAGACCCCAGAAGGTCAACCCGTCAAAGAATTTCACCACTGCATCATCTTCCTGCTAGTACTGGGAAGTTCATTGATTAGCGAGATCACGGGAATGCACGGTTTCTTCGGGCCTATGGTGTTGGGGTTGGAAGTACCGGAAGGATCCCCGTTAGCATTTACCTTGGTGGACAGACTGGATTTCTTCTTTTCTTTCGTGATGTTGCCTATCTACTTCATTGTGTGTGGTGGGAGAACAAACTTGACCCGAGTGACTCCTCACACTTGTCTTGTAGTTGAGCTCATGTCCCTGCTTGGTTTCTTGTCTAAGTTTATTGGAACCATCCTGCCTTGTGTCTTCCTCTGCGACATGTTTCTCAGAGACGCAATCACCCTCAGCCTCATACTTAACAGTATAGGAATTCTTGACATTCACTTTTACACCAGCGCGAATCAACTCAAGTTTATTGATAACCAATGCTTCAGTGTTCTGAATACAACAGCGATGTTCATTACAGGAATTGTGTCGCATCTCGTTAGTACCCTCTACGACCCTTCAACAAGATATATGGCAGACAAAAGACGTACCATACAGCACTCCTCACGCAAACTTAAGCTCCGGTTATTGGTCTGCGTACACCAGGAAGAGCAAGTCCCTAACATCATTAACCTGCTTGAAATGTCAAACCCCACTAGAGAGAGTCCAATTGCTGTTTATCTTCTCCATCTCATTGAGCTTGTGGGCCGTGCAACCCCGTTGCTTGTTGCTCACCAACCCTTCAAGCACTTTGATCATCGTCCCACCCCAATTATCAATGCCTTCAGAATGTATGAAAGAAACAACCTTTCCATCGTCACATTGCAGCCCTTCACTTCTATTGCGCCCTATGCAACCATGCATAACGACATTTGCACACTGGCTCTTGATAAGAGGGCTTCCCTTATCATCCTCCCTTTCCACAGGCAATGGAACACTGATCACACCAAGGATATATCCAAGTTTCGGAGTGTTAATCTCAGGGTCCTAGACAAAGCCCCTTGCTCTGTTGGGATCATTATCGATCGTGGGGCTTGGCGCGTCACCAAGTCTGTGCTAGGAAGCTGGTCTCTTTTCCGGGTTGGCGTGTTCTTCATAGGCGGAGCCGATGATCGTGAGGCAGTGGCATATGCAATGCGCATGTCTGAACATCCCAATGTTACTGTAACACTAGTGAGGTTCTTACCCTTACAGATGACCATTAATGATCATGATCCAAATGAGAGGAGAATGGATAATGACATGATCAACGAGTTTAAAGTATCAAAGGTAGGAAGTGAAAAGGCTCTGTACAAGGAGGAGATGGTGGTGGACAGTGTGTGTACATGCAGTGGAATTCGATCAATGGAGAACTCTTTTGATCTAATACTAGTTGGCAGACGCCATGAAGAGAATTCCCCCATGGTGTATGGACTAAATGACTGGATGGACTACCCGGAATTGGGATTTCTGGGGGACATACTAGCATCAGAGGATTTCACTGGGAAGGTATCAACATTGGTGATTCAACAGCATAGTTGGGCAGCCGGAGAAGAAAGCTCAAGACATTCAGAGGATAGTCCTAGCCGCCAAGACTCGTTTCTACCTCAGGTGTCCCCCAACGGTCTTAAAGGCTATTGA 2481 0.4603 MAEAQLVAGVELLTTPNNGSYAYRFGMKPKNVTAICIPQPHTNAGGLYLYRNPLRATTPLYLFQLAFASLLTSGCNFILKPFSQVTIVGQIMGGIIGGPSFIGRIDAFADMVFPISIIHLLETLSSFGIMFYLFLLGVKMDYGMIRSSGSKAWLIGFSTYLFPILLTVPVSLILKRYIKMDHELETSVQCLSLLVSSTTFHSVACFLEDLKLLNSELGRLAMSSSMISGGLSYTTLIFAFTARQSQLNGDGFGVWLCIIMSGIAQIIFTRVAIKPILIWMIKQTPEGQPVKEFHHCIIFLLVLGSSLISEITGMHGFFGPMVLGLEVPEGSPLAFTLVDRLDFFFSFVMLPIYFIVCGGRTNLTRVTPHTCLVVELMSLLGFLSKFIGTILPCVFLCDMFLRDAITLSLILNSIGILDIHFYTSANQLKFIDNQCFSVLNTTAMFITGIVSHLVSTLYDPSTRYMADKRRTIQHSSRKLKLRLLVCVHQEEQVPNIINLLEMSNPTRESPIAVYLLHLIELVGRATPLLVAHQPFKHFDHRPTPIINAFRMYERNNLSIVTLQPFTSIAPYATMHNDICTLALDKRASLIILPFHRQWNTDHTKDISKFRSVNLRVLDKAPCSVGIIIDRGAWRVTKSVLGSWSLFRVGVFFIGGADDREAVAYAMRMSEHPNVTVTLVRFLPLQMTINDHDPNERRMDNDMINEFKVSKVGSEKALYKEEMVVDSVCTCSGIRSMENSFDLILVGRRHEENSPMVYGLNDWMDYPELGFLGDILASEDFTGKVSTLVIQQHSWAAGEESSRHSEDSPSRQDSFLPQVSPNGLKGY* 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g0379 826 Pfam Sodium/hydrogen exchanger family 68 449 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Vvi8g0379 826 Gene3D - 59 466 IPR038770 -
Vvi8g0379 826 MobiDBLite consensus disorder prediction 796 826 - -
Vvi8g0379 826 PANTHER CATION/H + ANTIPORTER 35 793 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi8g0379 Vvi-Chr8 9772720 9775397 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi8g0379 31 807 Antiporter Super Family AT2G13620 37.454 5.98e-175 523
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g0379 - - vvi:100853937 1642.86