Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g0334 ATGGACAACCAGGCCGCTCATCCAAATCCTCGGTCCCACCACCACCCCTTCGGCGGCGGCGGAGGAGGAGGAGGAGGAGGAGGGGGCCGTGAGGACTGCTGGAGCGAAGGCGCCACAGAGACTCTAGTGGAGGCGTGGGGAGATCGTTATCTGGAGCTCAACCGCGGTAACCTCCGTCAGAAGGACTGGAAGGAAGTTGCTGACGCCGTTAACAGTCGCCAGAACGGAGTAAAGCCCCGGAAGACCTACATCCAGTGCAAGAACCGGATCGACACCTTGAAGAAGAAGTACAAGCTCGAGAAATCGAAGCCGGCGCCGTCTTCCTGGCCATTCTACTCCCGCCTCGACTACCTGATCGGCGCCGCGGCGGCGGCAGCTCCGGGAGGGAAGAAATTCGCGGCGGCAGCGCAGCGGAAGTCCCCCGCCGTGACTTTCACCGTGAAGGCTGGGAAGGACAAGATCAGCCCTAGCCCCAACCATAACCCTAATGCCGTTGTGTATTCCGGCGGATCGTCATCGAAGTCGAGGCTGCAGTCGGCGGGGTCGACGGAGAGCTCTCGCGGCGGAGGCCTTGACGACGGCGATGACGAAGACGTGGTGTTCGATGGCCGGGTCAGGAAGCATCGGATGGATTCGATGGATTTATCGGATGGAGCGGCGTGTAGGGAATTGGCGAGGGCGATTTTGAAGTTTGGGGAGATTTATGAGAGGATTGAGTGTGCGAAGCAGCAGCAGATGATGGACTTGGAGAAGCAGAAGATGGAGTTCACTAAGGATCTGGAAGTTCAGAGGATGCATATGTTCATGGATGCTCAGCTCGAGCTTGAGAAGATGAAGCACCCCAAGTTTGCATCTGGCTCAGGTGAGCTCCATCATTTCCTCTTCTTGTATTCGCTGACTGATCCAATTGATTAA 915 0.5749 MDNQAAHPNPRSHHHPFGGGGGGGGGGGGREDCWSEGATETLVEAWGDRYLELNRGNLRQKDWKEVADAVNSRQNGVKPRKTYIQCKNRIDTLKKKYKLEKSKPAPSSWPFYSRLDYLIGAAAAAAPGGKKFAAAAQRKSPAVTFTVKAGKDKISPSPNHNPNAVVYSGGSSSKSRLQSAGSTESSRGGGLDDGDDEDVVFDGRVRKHRMDSMDLSDGAACRELARAILKFGEIYERIECAKQQQMMDLEKQKMEFTKDLEVQRMHMFMDAQLELEKMKHPKFASGSGELHHFLFLYSLTDPID* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g0334 304 MobiDBLite consensus disorder prediction 156 186 - -
Vvi8g0334 304 FunFam trihelix transcription factor ASIL2 34 99 - -
Vvi8g0334 304 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 12 280 IPR044823 -
Vvi8g0334 304 MobiDBLite consensus disorder prediction 150 198 - -
Vvi8g0334 304 Gene3D - 34 99 - -
Vvi8g0334 304 MobiDBLite consensus disorder prediction 1 34 - -
Vvi8g0334 304 Pfam Myb/SANT-like DNA-binding domain 31 116 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi8g0334 Vvi-Chr8 8891620 8892534 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi8g0334 218 292 Trihelix Transcription Factor Family AT3G14180 44.872 4.74e-16 76.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Vvi8g0334 Myb_DNA-bind_4 2.3e-25 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g0334 - - vvi:100253914 526.168