Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g0322 ATGAAGGGAAACCCTCATCCCGGAAATCGTTACGGGTGCACTCCTGCTGGATGCCCTGTTCATAAGTATATTGAGACGGCCATAGATGGCTCCAATGCTGTCATAATAACCTACAAAGGGACACATGACTATGCCATGCATGAACAAAGAGAAAGCGACATGGCCCATCGAGTGCTCCTCTCGTCGCGGCTGCCGCTGCCTGGCTCCACAGAATCATGGCGACGGGGAACGTTCCCAATCCTCGTTCTCATCCCAGCTGGAGATCAGCCATGGCCACTGAGTCCGTCGAAGGACCTCTTGCTGTCTTCACTCCGCGCAATCCCTTTCGTTTTCTTCCCCGAGTTCCCTCCGAGACTCTCTCTCACACTTGATCCGCTCAAGCACTGCGCTGAAGCTCTCAAGTTCTTCAAAGATAAGCTCCAGACGCCTGAGAAGACCCGCTAG 444 0.5383 MKGNPHPGNRYGCTPAGCPVHKYIETAIDGSNAVIITYKGTHDYAMHEQRESDMAHRVLLSSRLPLPGSTESWRRGTFPILVLIPAGDQPWPLSPSKDLLLSSLRAIPFVFFPEFPPRLSLTLDPLKHCAEALKFFKDKLQTPEKTR* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g0322 147 Pfam WRKY DNA -binding domain 2 43 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vvi8g0322 147 ProSiteProfiles WRKY domain profile. 1 47 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vvi8g0322 147 SMART WRKY_cls 1 46 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vvi8g0322 147 SUPERFAMILY WRKY DNA-binding domain 2 46 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vvi8g0322 147 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 2 52 IPR044810 GO:0003700
Vvi8g0322 147 Gene3D WRKY domain 1 46 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi8g0322 Vvi-Chr8 8585088 8585621 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi8g0322 1 46 WRKY Transcription Factor Family AT4G30935 65.217 3.21e-15 69.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vvi8g0322 WRKY 5.6e-06 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g0322 - - ccav:112501594 77.7962