Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g0296 ATGTCTCCACTGAAAATCGATGAGTTTGGACGGTTGGTCAAAGAAGGTGCTAGTGACAGTGATTCTGATGTTTCATGCTATGCTAGGAAACATGGTAAATCTGAGAGTTGTGGAGATGTAGCTGCTCAGGTGCTGGAAATCATCCGTGGAAGCAGATTAGAATACCATGAGAATGAGGGAGAAAGTGCAGCTGCATCAACAGATCAGATAGAGAGTCCCCATGAGGAAAATGCTCGTGAGAAGAGAAAGTCAGGCTCCAGTAAAACCGATGTTCCTCTTCTCTTGGACCTGCAGGTGGAGGAGATAAAATATGTGTTTGAAGTGAAGACGATTCAGAGGATAGAGTTTCTGGTGCTTTCTACTCTTCAGTGGAAGGTGAATCCAGTGACCCCAACTTCATTCTTTTGA 408 0.4436 MSPLKIDEFGRLVKEGASDSDSDVSCYARKHGKSESCGDVAAQVLEIIRGSRLEYHENEGESAAASTDQIESPHEENAREKRKSGSSKTDVPLLLDLQVEEIKYVFEVKTIQRIEFLVLSTLQWKVNPVTPTSFF* 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g0296 135 Gene3D - 90 127 - -
Vvi8g0296 135 SUPERFAMILY Cyclin-like 90 127 IPR036915 -
Vvi8g0296 135 MobiDBLite consensus disorder prediction 72 87 - -
Vvi8g0296 135 MobiDBLite consensus disorder prediction 56 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi8g0296 Vvi-Chr8 7870250 7872076 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi8g0296 91 135 Core Cell Cycle Gene Families AT5G67260 75.556 1.60e-18 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g0296 K14505 - vvi:100264346 155.606