Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g0286 ATGGCAAATTCACCTAGTGACACAGGGTTTACCAAGTGTTTTTCGGGTGCTGTACGCCGGCTACTATGCACAGGTAGTCTCCCAACACACCCATCTGATCAGATTCCAGAATTGAGCACAGATGAGCTGAAGAATCCATGTAAAGATTCAGTGGGTGAGGCCACGGTTGAGGTTGGCGCAAGTCCAGGAATAGTGGCAAGGCTAATGGGGTTGGATTCATTGCCAGAGAGAAATTGGGTTCCAAGAGCAGCAGCTCTGAATTCAATTACTCGAAGCATGTCTCTGAATTTCATGGATTACTTTCCGGAAGTTGATCCAGCTCAAGGTGGCCAGCATCGTCGTGTTAGGACTTCAGTGTCCTTCCGTGAGGTCCCCACCTCCCTGCACCAGCAAAATCATGACTGCTTTGTTCTCTTCTTGGATAATGTGGGTGAAGCAGGGGAGATGGGACCACACATGAGGAAATCTGAAATGAGGTTTCCAGAATTGAAGCAGAAGAAAGAAGAGAGAAGCAAAAGCAAAGACAACTCGAAAGAGAAGGCGCTCGTGAAGAAAAGGGAGAGTGGAGAGAACAGCAAGAGGGCTTGTAAAGGAAAGAATGAGCCGAAGAGGGTGTCTGGTAAACTTTCTTCCAAGCTTGGTACCTGCTATGGAGTTGAGGATTCTGGTTCAGTCTTGCTTCAGAAGAAGAAGGATGTTCCTGCAACTTCCAAGGTGAAAAGCCCAGTGAGGGAAGCCTCAGTTGGATCAAAATTCACAAAGAAGAAGGACAAGGGTCAGCGTGGAGTCAACAAAGTAGAGCCAGAGTGTGATTCAGAAAATTCAAGTCCAGTTTCAGTTCTTGATCACTATGGTTTTCCAGTCCATCATCCAACTCCATCAGGACATTCAAGGAAGATGGGATCCAAAAGGAAGAAATCATCATCAAAACTGGCTAACTGGGACTACCCAGCTCCAAACCTCATTCGAATATCAAACACTGAAGATCAAGAACAGAGGGCAATCAAGAAAAAGGAAAACAAGCAATCCAAGAAAGATTATTACACAGAAATTTTCAGCAAGGTCTGCAAGTTGACAGAAGAAGAAATGAAAGAGTCCAAGTGGGAAGCTAAAGAAGCGAGTAAGACTGAATATTTTGAAGAGATCTGCACAGAGTTTGAGCAACAAATCCTCAATCTTCTGTTACACCAGGTTGTCAATGAACTCAAGGAATTTCCCATGTAA 1224 0.4477 MANSPSDTGFTKCFSGAVRRLLCTGSLPTHPSDQIPELSTDELKNPCKDSVGEATVEVGASPGIVARLMGLDSLPERNWVPRAAALNSITRSMSLNFMDYFPEVDPAQGGQHRRVRTSVSFREVPTSLHQQNHDCFVLFLDNVGEAGEMGPHMRKSEMRFPELKQKKEERSKSKDNSKEKALVKKRESGENSKRACKGKNEPKRVSGKLSSKLGTCYGVEDSGSVLLQKKKDVPATSKVKSPVREASVGSKFTKKKDKGQRGVNKVEPECDSENSSPVSVLDHYGFPVHHPTPSGHSRKMGSKRKKSSSKLANWDYPAPNLIRISNTEDQEQRAIKKKENKQSKKDYYTEIFSKVCKLTEEEMKESKWEAKEASKTEYFEEICTEFEQQILNLLLHQVVNELKEFPM* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g0286 407 MobiDBLite consensus disorder prediction 149 209 - -
Vvi8g0286 407 Coils Coil 324 344 - -
Vvi8g0286 407 PANTHER OS05G0128300 PROTEIN 1 406 - -
Vvi8g0286 407 Pfam DUF761-associated sequence motif 61 76 IPR032795 -
Vvi8g0286 407 MobiDBLite consensus disorder prediction 149 206 - -
Vvi8g0286 407 MobiDBLite consensus disorder prediction 249 268 - -
Vvi8g0286 407 MobiDBLite consensus disorder prediction 232 313 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi8g0286 11 402 TRM (TON1 Recruiting Motif) Superfamily AT5G01370 30.131 1.04e-23 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g0286 - - vvi:100247091 785.023