Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g0284 ATGGAGGGGCATCATATCAGTGTTCATATCGATACGGGTGATAGGTTTCCTCAATGGAGTATTCAGGAGACAAAGGAGTTTTTGATGATTCGGGCAGAGTTGGATCGGACTTTCATGGAGACCAAACGGAACAAGCTTCTGTGGGAAGTGATTGCGAACAAGATGAAGGAGAAGGGCTATAATCGAAGCGCGGATCAGTGCAAGTGCAAGTGGAAGAATCTGGTCACCAGATACAAGGGATGCGAAACGATGGAGCCAGAAGCCATGAGGCAACAATTTCCGTTTTACAATGAGTTGCAGGCGATTTTCACAGCGAGGATGCAAAGAATGCTGTGGATTGAGGCAGAAGGCGGGGCAAAGAAGAAAGGGGTGCAGCTATCTTCGGAAGATGAAGACGAGAACGAGGAAAGCGAAGGGGAGAAGGGAAGCAGCAAGAAGAAGAAAAAGGGCAAGACCAGTGTGAATGTGGGTGGCAGCAGCAGCGGAGGTAGTTTCAATTTGAAAGAAGTTTTGGAAGATTTCATGAAGCAGCAGGTGCAAATGGAGGTGCAATGGCGAGAAGTGTTCGAGGAGAGGGAAAAGGAGAGGAGAGCCAAGGAGATGGAGTGGAGACAAACCATGGAGGCATTGGAAAACGAGAGGATAATGATGGATAGGAGGTGGAGGGAGAGGGAAGAGCAAAGGCGGATGAGAGAAGACGCTAGGTCTGAGCGGAGAGACGCTCTTATCACAGCACTTCTAAACAAGCTCAGAAGAGAAGAGATTTCTTCTGGAGAAGAGGAAGCTTTGAGAGATTCAATGGGAATGTTTTCTTTCGAGTGGGGTTATGTTTGA 834 0.4796 MEGHHISVHIDTGDRFPQWSIQETKEFLMIRAELDRTFMETKRNKLLWEVIANKMKEKGYNRSADQCKCKWKNLVTRYKGCETMEPEAMRQQFPFYNELQAIFTARMQRMLWIEAEGGAKKKGVQLSSEDEDENEESEGEKGSSKKKKKGKTSVNVGGSSSGGSFNLKEVLEDFMKQQVQMEVQWREVFEEREKERRAKEMEWRQTMEALENERIMMDRRWREREEQRRMREDARSERRDALITALLNKLRREEISSGEEEALRDSMGMFSFEWGYV* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g0284 277 ProSiteProfiles Myb-like domain profile. 19 75 IPR001005 -
Vvi8g0284 277 Pfam Myb/SANT-like DNA-binding domain 18 102 IPR044822 -
Vvi8g0284 277 PANTHER FI21293P1 13 252 - -
Vvi8g0284 277 CDD GT1 17 82 - -
Vvi8g0284 277 Gene3D - 19 80 - -
Vvi8g0284 277 FunFam Zinc finger and SCAN domain-containing 20 19 80 - -
Vvi8g0284 277 MobiDBLite consensus disorder prediction 122 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi8g0284 Vvi-Chr8 7652679 7656300 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi8g0284 14 253 Trihelix Transcription Factor Family AT5G01380 53.358 2.35e-72 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Vvi8g0284 Myb_DNA-bind_4 1.1e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g0284 - - vvi:100259062 395.201