Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g0276 ATGGCAATTCAACTGAAGCTCCCCTACACATCCACGTTGAAGCACAGGAAGCAAGGCAAGCCACCCATCTTCAACATTTCAACACCACCAACTCTGCAGGTCCATGCCTCCTCAAGCAGTGCCCGGCAACTGATAGGGTCCGGGGCAGTCCGGCCGATACTGCCAAAGGATGCAGCCTCTGCTTTGAACTCTGAAGGCTTCATACTCCTGGACGTCAGGCCAGCGTGGGAGAGGGAGAAGGCACGTGTCTCGGGGTCAATGCACGTGCCACTCTTTGTTAAGGACATGGACAACAGCCCCATCACTCTGCTGAAGAAGTGGGTGCATTTTGGGTACATTGGGCTGTGGACTGGCCAGAATTTCACCATGATCAATCCTGATTTTGTCGGGCAAGTGGAAATAGCTGTTCCTGATAAGGACGCTAAGCTCCTTGTTGCTTGTGGAGAAGGGCTGAGGTCCATGATGGCAGCTTCAAAGCTACATGGAGGAGGATACAGGAACTTGGGGTGGCTGGCAGGTGGATTTAATCGGGCCAATGATGGTGATTTTCCTGATGTCGAAGGGACTGAGAAGCTGCAGTATGCCACAATAGGGGGTGTGTCCTACTATTTCCTTCAATTGCTTATACTCCTGCAAGCTGTGGGTGAAAGAAGTTGA 657 0.519 MAIQLKLPYTSTLKHRKQGKPPIFNISTPPTLQVHASSSSARQLIGSGAVRPILPKDAASALNSEGFILLDVRPAWEREKARVSGSMHVPLFVKDMDNSPITLLKKWVHFGYIGLWTGQNFTMINPDFVGQVEIAVPDKDAKLLVACGEGLRSMMAASKLHGGGYRNLGWLAGGFNRANDGDFPDVEGTEKLQYATIGGVSYYFLQLLILLQAVGERS* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g0276 218 Gene3D - 50 195 IPR036873 -
Vvi8g0276 218 ProSiteProfiles Rhodanese domain profile. 63 187 IPR001763 -
Vvi8g0276 218 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 10 1 217 IPR044614 -
Vvi8g0276 218 SMART rhod_4 53 184 IPR001763 -
Vvi8g0276 218 CDD RHOD 57 176 - -
Vvi8g0276 218 Pfam Rhodanese-like domain 55 176 IPR001763 -
Vvi8g0276 218 FunFam Rhodanese-like domain-containing protein 10 50 194 - -
Vvi8g0276 218 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 47 187 IPR036873 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi8g0276 6 218 Sulfurtransferasese or Rhodanese AT3G08920 59.624 5.45e-87 254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g0276 - - vvi:100252319 441.81