Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi8g0261 | ATGTCATCTTCCAAAAAATCCCAGTTGGCCTCTTCACAATTTCCTTGTACTTATTTATTCAAGATGGAATATAAAAAAGGTTTAGTTTTTATGTTATCGAGAGAACCGTGGATTCGCGGATCTGGGGTTATCTCTTGTTGGCGAAGCATAGATTTCGGCTCCCAAGAATGGAGGGATGGGCTGCATGTTCCTAATGCGGTGGGATGGGAGCTTAACAGTGGGAAGATTGGTGATGGTAGTAGCCCCAAGGAAAACGATAAATCTGTTGAGGAATTTCTTTTGGCTCCACTTCGTGCACTAGACAAGCTGCCTGTGAATCTCCATGCGCTACAGACTTGCAATGTTGGCAAGTCTGTGAATCATTTATGTAGTCATAAAAATTCTGAAATTAAGAAGAAAGCTAGAAGTTTAGTTGACACATGGAAGAAACCGAGTTGA | 438 | 0.4155 | MSSSKKSQLASSQFPCTYLFKMEYKKGLVFMLSREPWIRGSGVISCWRSIDFGSQEWRDGLHVPNAVGWELNSGKIGDGSSPKENDKSVEEFLLAPLRALDKLPVNLHALQTCNVGKSVNHLCSHKNSEIKKKARSLVDTWKKPS* | 146 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi8g0261 | 145 | CDD | TFIIS_I | 74 | 143 | - | - | |
Vvi8g0261 | 145 | Gene3D | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 | 79 | 144 | IPR035441 | - | |
Vvi8g0261 | 145 | ProSiteProfiles | TFIIS N-terminal domain profile. | 68 | 145 | IPR017923 | - | |
Vvi8g0261 | 145 | PANTHER | BAH AND TFIIS DOMAIN-CONTAINING PROTEIN-RELATED | 70 | 143 | - | - | |
Vvi8g0261 | 145 | Pfam | TFIIS helical bundle-like domain | 97 | 144 | IPR017923 | - | |
Vvi8g0261 | 145 | SUPERFAMILY | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 | 88 | 143 | IPR035441 | - | |
Vvi8g0261 | 145 | SMART | TFS2_5 | 68 | 145 | IPR003617 | GO:0005634 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vvi8g0261 | Vvi-Chr8 | 7101154 | 7101591 | Dispersed/Transposed |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | IWS1 | Vvi8g0261 | Med26 | 1.1e-12 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi8g0261 | - | - | vvi:100252575 | 137.117 |