Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g0246 ATGTCAAATCATACTAAGTTGATAATGAAGAGGATACTTCAGATTTACAAAGGGTTTGAAGGCCTCAAAGTGTTGGTTGATGTGGGAGGTGGTATTGGGGTCACTCTTAGCATCATCACTTCTAAGTATCCTCATATTAAGGGCATCAATTATGATCTGCCTCATGCTTTAGCAAACGCCCCCTCTTATCCTGGTGTGGAGCATGTTGGGGGAGATATGTTTGAGAGTGTTCACAAAGGAGACGCCATTTTTATGAAGTGGATTCTTCATGACCGGAGTGATGAGCACTGTCTGAAGCTTCTCACCAACTGCTTTGAAGCTCTCCCTGATAACGAGAAGGTGATCATCGTTGAATCCATTCTTCATATGGCTCCAAAGAACACAGTCTCAACCAACATTCCCTTCGAGCAAGATCTACTCATGCTGGCTCAAAACCCTGGAGGAAAAGAAAGGACCCAGAAGGAGTATGAGACCTTGGCCATAAAATCAGGATTTTTTGGTTGCATGGTCATCTGCAGTGTTTACAACAGTTGGGTTATGGAGTTCCCCAAGACAGCACATCCATAG 567 0.4392 MSNHTKLIMKRILQIYKGFEGLKVLVDVGGGIGVTLSIITSKYPHIKGINYDLPHALANAPSYPGVEHVGGDMFESVHKGDAIFMKWILHDRSDEHCLKLLTNCFEALPDNEKVIIVESILHMAPKNTVSTNIPFEQDLLMLAQNPGGKERTQKEYETLAIKSGFFGCMVICSVYNSWVMEFPKTAHP* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g0246 188 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 184 IPR016461 GO:0008168
Vvi8g0246 188 PANTHER O-METHYLTRANSFERASE 1 165 IPR016461 GO:0008168
Vvi8g0246 188 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 1 181 IPR029063 -
Vvi8g0246 188 FunFam F16P17.4 protein 5 173 - -
Vvi8g0246 188 Pfam O-methyltransferase domain 1 165 IPR001077 GO:0008171
Vvi8g0246 188 Gene3D Vaccinia Virus protein VP39 5 173 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi8g0246 Vvi-Chr8 5620300 5621064 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi8g0246 1 184 Monolignol Biosynthesis Gene Families AT5G54160 60.870 1.19e-79 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g0246 K13066 - vvi:100253843 390.193