Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g0200 ATGGACTCTGCACCTCATCTAGTGGAAGACTTCCAGGGTCTCCTCCAAGTCTACAGCGACGGTTCTGTCCTCCGCTCCACCACTTTTCCCTTCCACATTCCCCTCCACGATGATGGCTCCGTCGTCTGGAAAGACTCTCTTTTCCACAAACACCATAACCTCCACCTCCGCCTCTATAAGACGGCGGTGTCCCCCACCAAAGGAAACCTCCCGATTCTCTACTACTTTCATGGAGGCGGCTTCTGCGTCGGCTCTCGCACGTGGCCCAACTGCCATAACTGCTGCCTCCGTCTGGCGTCTGGGCTTGGCGCACTCGTGGTTGCACCGGACTTCCGCCTGGCCCCCGAGCACAGGCTGCCGGCGGCGGTGGAGGATGCAGTGAGCTCACTCAAGTGGCTACAAGGTCAAGCTGTATCGGAGGATTGCGAAGAGTGGCTGAGTGAAGGGGTTGACCTGGACCGGGTCTTCGTAGTGGGAGACTCGTCTGGAGGGAACATGGCGCACCAGGTGGCAGTTCAGATGGGGGCCGGTTTGCTAGAACTGGAGCCAATTCGGGTACGAGGTTTTGTGTTGATGGCGCCATTTTTTGGGGGAACAGTGAGAACAAGATCAGAGGAGGGTCCGAGTGATACTATGTTCAACTTAGAACTCTTTGACAGGTTTTGGAGGCTATCAATACCAGAAGGTGGGACAGCAGATCATCCTTTGGTAAACCCATTTGGACCTTGTAGTCCAAGCTTGGAGCCACTGAAGCTCAATCCCATCTTGGTGGTGGTTGGTGGTAATGAGCTATTGAAAGACAGGGCAGAGCAGTATGCCAAGAGGTTGAAAGAGATGGGAAAAGGAATTGAGTATGTGGAATTTAAGGGAGAGGGACATGGTTTCTTCACCAATGACCCATACTCTGATGCAGCTACTGCAGTTTTGCCTGTTATCAAGCGTTTTATTACTCAAAACTCCTAG 963 0.5317 MDSAPHLVEDFQGLLQVYSDGSVLRSTTFPFHIPLHDDGSVVWKDSLFHKHHNLHLRLYKTAVSPTKGNLPILYYFHGGGFCVGSRTWPNCHNCCLRLASGLGALVVAPDFRLAPEHRLPAAVEDAVSSLKWLQGQAVSEDCEEWLSEGVDLDRVFVVGDSSGGNMAHQVAVQMGAGLLELEPIRVRGFVLMAPFFGGTVRTRSEEGPSDTMFNLELFDRFWRLSIPEGGTADHPLVNPFGPCSPSLEPLKLNPILVVVGGNELLKDRAEQYAKRLKEMGKGIEYVEFKGEGHGFFTNDPYSDAATAVLPVIKRFITQNS* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g0200 320 SUPERFAMILY alpha/beta-Hydrolases 5 318 IPR029058 -
Vvi8g0200 320 Pfam alpha/beta hydrolase fold 74 296 IPR013094 GO:0016787
Vvi8g0200 320 PANTHER ARYLACETAMIDE DEACETYLASE 10 296 - -
Vvi8g0200 320 Gene3D alpha/beta hydrolase 14 320 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi8g0200 Vvi-Chr8 4202931 4205774 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi8g0200 7 302 Carbohydrate Esterase AT5G16080 35.762 4.38e-55 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g0200 - - vvi:100259891 664.455