Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g0172 ATGTTGAATTCACATTCCCATTTAAAATTGAAAACGGATCTTGCAAATGCTTCTTTACTATCACAAACACAAGCAGCAGAAGAGGCCAAGCAAGCTTGTGCTGCTGCTCAGGCCCAAAATGAGGAACTAACCACAAAGCTTGGTGATGCAGAGAAGAAAGTGGATCAACTCGAGGATTCAGTGCAGAGGTTTGGGCTTTGTGCATCTCCACAAAGTGCTGGGTTCTCATTTCTTAATGGTCGGGTGCTTGGTGGACTGGATGACTTGAGACAAGTTGAAGCCAAATATCCAGCTTTGCTTTTTAAACAGCAACTCACAGCCTTCCTTGAGAAGATATATGGAATGATAAGAGACAATTTAAAGAAAGAGATTTCCCCATTGCTTGGATTGTGTATTCAGACACTCAACTTGTTGCTTTACTTTCATGAAAGATTGAAGAACATGCACCTAGAACATCCCATGAAGAGACGTTCTCAAGCTAATGCAGTTGCACAACAAGCGTTGATTGCTCATTGGCAAAGCATTGTGAAAAGCCTGAATTATTACTTGAAGATAATGAAAGCAAACCATGTTCCGCCATTCGTAGTCTGCAAGGTATTCACTCAGATATTTTCATTCATCAATGTTCAATTATTCAACAGTCTCCTTTTGAGGCGTGAATGTTGCTCATTCAGCAATGGGGAGTTTGTTAAGACAGGATTGGCTGAGTTAGAAAACTGGTGCCATGAAGCAACCGAAGAGGTTATTTCAAGCATGAGAGTAATGATGACTGAAGATTCGAACAATGCTGTCAGCAGTTCGTTCTTATTGGATGATGACTCAAGTGGTTGCCTTTTCCTTCCAATTCTCCTCTCTTCCCACACTGAAAAGTTTGGGTTTGAAGGGGCGTTTCAAAGTCCCATAAAGGTGAGACTGTTATCCATAGAAGGGGTAGGAGAGAGTATGAATTTGTTCATCATCAAGCACCCAACCAAGGGTGGAACAAGCTTTTAG 993 0.4149 MLNSHSHLKLKTDLANASLLSQTQAAEEAKQACAAAQAQNEELTTKLGDAEKKVDQLEDSVQRFGLCASPQSAGFSFLNGRVLGGLDDLRQVEAKYPALLFKQQLTAFLEKIYGMIRDNLKKEISPLLGLCIQTLNLLLYFHERLKNMHLEHPMKRRSQANAVAQQALIAHWQSIVKSLNYYLKIMKANHVPPFVVCKVFTQIFSFINVQLFNSLLLRRECCSFSNGEFVKTGLAELENWCHEATEEVISSMRVMMTEDSNNAVSSSFLLDDDSSGCLFLPILLSSHTEKFGFEGAFQSPIKVRLLSIEGVGESMNLFIIKHPTKGGTSF* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g0172 330 Coils Coil 19 60 - -
Vvi8g0172 330 Pfam DIL domain 199 246 IPR002710 -
Vvi8g0172 330 ProSiteProfiles Dilute domain profile. 80 330 IPR002710 -
Vvi8g0172 330 SMART DIL_2 198 274 IPR002710 -
Vvi8g0172 330 PANTHER DILUTE DOMAIN-CONTAINING PROTEIN YPR089W 31 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi8g0172 Vvi-Chr8 3511251 3514996 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi8g0172 17 64 Myosins gene family AT5G20490 50.000 2.77e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g0172 K10357 - vvi:100266890 305.449