Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g0170 ATGATAAAAAAAACTACATTGAACGTACCTGGAACTGCCCTCTCAGATTTCATTTTTTTCCTTGTTACCCTTCCCTCTGCTAAAGGAATCTCCTCTCTCCCAAAGCTCTCTGCTCCTACCCACAATGTTGTCACCCCCTCTCCAGAAACATGCTATCTGTTTTTCCTCTTCTCACAGCTAAACTCTACCCTCTTTTTCATTCCCATGCTCCCTTTCCTCTGCTACTTCCTCCTCCCCGAAATATCTCCAGGCCGCCCGTCCAAAAAGCAACCTCCTTCTCTGACACCGAAACGCTCCTCTACTAACACTCTCCTTTTGAGGCGTGAATGTTGCTCATTCAGCAATGGGGAGTTTGTTAAGACAGGATTGGCTGAGTTAGAAAATTTGTGCCATGAAGCAACCAAAGAGTATGCTGGCTCAGCTTGGGATGAACTGAGGCATATCAGACAAGCAGTTGGATTCCTGGTTTGA 471 0.4607 MIKKTTLNVPGTALSDFIFFLVTLPSAKGISSLPKLSAPTHNVVTPSPETCYLFFLFSQLNSTLFFIPMLPFLCYFLLPEISPGRPSKKQPPSLTPKRSSTNTLLLRRECCSFSNGEFVKTGLAELENLCHEATKEYAGSAWDELRHIRQAVGFLV* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g0170 156 Pfam DIL domain 101 155 IPR002710 -
Vvi8g0170 156 ProSiteProfiles Dilute domain profile. 41 156 IPR002710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi8g0170 Vvi-Chr8 3490078 3492369 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi8g0170 102 156 Myosins gene family AT1G17580 83.636 2.07e-28 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g0170 K10357 - vvi:100266890 111.694