Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g0159 ATGTCGGAAATGATGAAAAACCCAAGAGTCATGGAACAGGCACAAGCGGAGGTAAGGCGGGTCTTTGATGGAAAAGGGGATGTGGATGAAACGGGCATTGATGAATTAAAATTCTTAAAGGCGGTAGTCAGTGAAACCTTGAGGCTACACCCTCCTTTCCCATTGTTGCTTCCAAGAGAATGTAGGGAGAAGTGTAAGATTAATGGATATGAGGTACCTGTGAAGACCAGAATGACCATTAATGCATGGGCAATTGGGAGGGATCCTGATTATTGGACTGAAGCTGAGAGATTTTACCCAGAGAGATTCCTTGATAGTTCAGTTGATTACAAGGGTGCTGATTTTGGATTCATCCCATTTGATGCTGGAAGGAGGATGTGCCCAGGCATATTGTTTGCCATACCCAGCATTGAGCTGCCACTAGCTCATTTACTGTTCCATTTTGACTGGGAACTCCCCAACGGAATGAGGCATGAGGATCTAGACATGACCGAGGTTCATGGCTTATCAGCCAAAAGAAAACACAGTCTGCATTTAATTCCCATTCCTTATAATTCATAG 561 0.4403 MSEMMKNPRVMEQAQAEVRRVFDGKGDVDETGIDELKFLKAVVSETLRLHPPFPLLLPRECREKCKINGYEVPVKTRMTINAWAIGRDPDYWTEAERFYPERFLDSSVDYKGADFGFIPFDAGRRMCPGILFAIPSIELPLAHLLFHFDWELPNGMRHEDLDMTEVHGLSAKRKHSLHLIPIPYNS* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g0159 186 Gene3D Cytochrome P450 1 178 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g0159 186 PRINTS P450 superfamily signature 118 127 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g0159 186 PRINTS P450 superfamily signature 41 52 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g0159 186 PRINTS P450 superfamily signature 6 19 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g0159 186 PRINTS E-class P450 group I signature 117 127 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g0159 186 PRINTS E-class P450 group I signature 127 150 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g0159 186 PRINTS E-class P450 group I signature 40 58 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g0159 186 PRINTS E-class P450 group I signature 81 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g0159 186 PANTHER OS08G0105600 PROTEIN 1 185 - -
Vvi8g0159 186 SUPERFAMILY Cytochrome P450 1 183 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g0159 186 FunFam Uncharacterized protein 1 178 - -
Vvi8g0159 186 Pfam Cytochrome P450 3 169 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi8g0159 Vvi-Chr8 3295936 3296496 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi8g0159 1 184 Cytochrome P450 AT3G26330 51.087 3.84e-67 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g0159 - - vvi:100251316 335.109